| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20002885m |
| Family | CBM47 |
| Protein Properties | Length: 147 Molecular Weight: 15872 Isoelectric Point: 5.0347 |
| Chromosome | Chromosome/Scaffold: 2 Start: 4270664 End: 4272506 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM47 | 17 | 142 | 4.5e-24 |
| SSYYSDTTGPTLAVNGDKTSIFQSGFNDTTPWLSIDLGAIYSVSKIVIYNRQDCCGSRLYNAEVRVGVVPISALADGWRIPENTLVWTLGGAGTTGAVYT IKLSPPYEGRWVTLQNKGGDFLHITE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 147 Download |
| MPAGPLNLAL NKQVYASSYY SDTTGPTLAV NGDKTSIFQS GFNDTTPWLS IDLGAIYSVS 60 KIVIYNRQDC CGSRLYNAEV RVGVVPISAL ADGWRIPENT LVWTLGGAGT TGAVYTIKLS 120 PPYEGRWVTL QNKGGDFLHI TEMEVY* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00057 | FA58C | 2.0e-7 | 1 | 69 | 69 | + Substituted updates: Jan 31, 2002 | ||
| smart00607 | FTP | 9.0e-11 | 7 | 145 | 149 | + eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain. | ||
| pfam00754 | F5_F8_type_C | 3.0e-12 | 13 | 143 | 139 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABQ18231.1 | 5e-16 | 3 | 146 | 124 | 254 | bindin precursor 2 repeat variant [Crassostrea gigas] |
| GenBank | ABQ18234.1 | 0.00000000000002 | 3 | 146 | 124 | 254 | bindin precursor 5 repeat variant [Crassostrea gigas] |
| DDBJ | BAF76636.1 | 0.00000000000001 | 7 | 146 | 99 | 251 | tachylectin-4 [Tachypleus tridentatus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1k12_A | 0.000000000003 | 29 | 145 | 36 | 150 | A Chain A, Fucose Binding Lectin |
| PDB | 3cqo_C | 0.0000000002 | 7 | 146 | 5 | 144 | A Chain A, Crystal Structure Of A F-Lectin (Fucolectin) From Morone Saxatilis (Striped Bass) Serum |
| PDB | 3cqo_B | 0.0000000002 | 7 | 146 | 5 | 144 | A Chain A, Crystal Structure Of A F-Lectin (Fucolectin) From Morone Saxatilis (Striped Bass) Serum |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GT033236 | 148 | 6 | 146 | 0.000000005 |
| DV448053 | 121 | 26 | 146 | 0.000006 |
| GT033236 | 68 | 6 | 70 | 0.0001 |
| DV101342 | 110 | 43 | 146 | 0.0003 |
| DV100301 | 110 | 43 | 146 | 0.0003 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Volvox carteri | Vocar20011098m | Vocar20011161m | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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