| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20004774m |
| Family | GT49 |
| Protein Properties | Length: 488 Molecular Weight: 53847 Isoelectric Point: 8.6308 |
| Chromosome | Chromosome/Scaffold: 91 Start: 111396 End: 114900 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT49 | 85 | 373 | 7.2e-32 |
| LPVTLFTHSDLGRLKSVEAQCRGFPGGAISVAVWIPLIAPNTTSKAASSSSPEQQQRQSSLPDLDASQLNALRNATEQVDGLFRSLDQQLSPQSPAAQSS SANDDTSTSTSTSTSTSTSSNCVLRVMLLYELVADDIMAALMPLNILRNTAVLAATTPLVAMVDADMALNRGLAAEVLVNEARVAELKRKATEERTVWVV PIFDTSDKLPFRDRQAAVDAAVAGGPDAKAQLLEMWRNRSNIYPYGIHGFTAGHGPTDYEQWKQSNTDYSITYREGYEPFFIGDRQRPT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MPFARSATRA SVFVTLLNLF AAAAFAAWQI PPKDEPKEVM ADALMSCYNA MFSPEPIDMK 60 TYLADSPSRS LRLHKVWWSH REPRLPVTLF THSDLGRLKS VEAQCRGFPG GAISVAVWIP 120 LIAPNTTSKA ASSSSPEQQQ RQSSLPDLDA SQLNALRNAT EQVDGLFRSL DQQLSPQSPA 180 AQSSSANDDT STSTSTSTST STSSNCVLRV MLLYELVADD IMAALMPLNI LRNTAVLAAT 240 TPLVAMVDAD MALNRGLAAE VLVNEARVAE LKRKATEERT VWVVPIFDTS DKLPFRDRQA 300 AVDAAVAGGP DAKAQLLEMW RNRSNIYPYG IHGFTAGHGP TDYEQWKQSN TDYSITYREG 360 YEPFFIGDRQ RPTLNPFLLN CSAYTRTLAF VFPSRTDSLF PCRMQHYELV QLANGTSIRA 420 RAANYEHSKS TFAAACAEMK DGTYQVVMNA AAEHCRAVLP WWRPKVANRP TAAAGRTSTL 480 RTRWRHR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13896 | Glyco_transf_49 | 2.0e-19 | 86 | 372 | 298 | + Glycosyl-transferase for dystroglycan. This glycosyl-transferase brings about the glycosylation of the alpha-dystroglycan subunit. Dystroglycan is an integral member of the skeletal muscular dystrophin glycoprotein complex, which links dystrophin to proteins in the extracellular matrix. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH03159.1 | 3e-39 | 71 | 377 | 8 | 260 | InvC [Volvox carteri f. nagariensis] |
| GenBank | EFA01545.1 | 0.00000000003 | 209 | 366 | 345 | 480 | hypothetical protein TcasGA2_TC007106 [Tribolium castaneum] |
| RefSeq | XP_001696547.1 | 6e-33 | 71 | 377 | 15 | 266 | hypothetical protein CHLREDRAFT_187123 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001700806.1 | 6e-26 | 95 | 377 | 11 | 262 | hypothetical protein CHLREDRAFT_187466 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001701602.1 | 0.000000000001 | 225 | 463 | 94 | 376 | predicted protein [Chlamydomonas reinhardtii] |
| Transmembrane Domains | ||||
|---|---|---|---|---|
 | ||||
| Start | End | |||
| 12 | 31 | |||
| Signal Peptide | ||||
|---|---|---|---|---|
 | ||||
| Cleavage Site | ||||
| 26 | ||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| FD804992 | 303 | 56 | 357 | 3e-27 |
| GE262039 | 302 | 71 | 370 | 0.00000005 |
| FD828047 | 117 | 262 | 377 | 0.0000001 |
| GE144920 | 146 | 224 | 369 | 0.00006 |
| FD803838 | 165 | 206 | 369 | 0.0003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |