| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20004836m |
| Family | GT8 |
| Protein Properties | Length: 600 Molecular Weight: 63502.5 Isoelectric Point: 9.0811 |
| Chromosome | Chromosome/Scaffold: 9 Start: 1065370 End: 1071745 |
| Description | plant glycogenin-like starch initiation protein 6 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 19 | 285 | 1e-34 |
| EAATTSIKTTPARSSEAYATLVYGEDFVLAARVLGQSLRESGTTRDMVALTTGSLKASSELTLAADGWRVVHVAPVKNPGTGPQPTGFPPRFAYVYTKLY IFQMTEYKKIVFLDADVLVIRNMDVIFKCPGFCAALRHSERFNTGVMSLVPSLEMYDDMMAKMRSMPSYTGGDQGFLNSYFPSFAHSPLFDPETPYTPDQ YKAAADMDSKSALQPVQQQQQQYMRLPTTFNADIGLYVVGSNRWMLPRSSLYVIHYTLGPFKPWVWW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 600 Download |
| MLGLTASVIG ILVASLASEA ATTSIKTTPA RSSEAYATLV YGEDFVLAAR VLGQSLRESG 60 TTRDMVALTT GSLKASSELT LAADGWRVVH VAPVKNPGTG PQPTGFPPRF AYVYTKLYIF 120 QMTEYKKIVF LDADVLVIRN MDVIFKCPGF CAALRHSERF NTGVMSLVPS LEMYDDMMAK 180 MRSMPSYTGG DQGFLNSYFP SFAHSPLFDP ETPYTPDQYK AAADMDSKSA LQPVQQQQQQ 240 YMRLPTTFNA DIGLYVVGSN RWMLPRSSLY VIHYTLGPFK PWVWWSGWLV RENPAWQAYR 300 NRLRADSRGL SGGRTHRQLF AERWMVLLPW AVVLTAICIH WSVLAPALLH AATTALPAVS 360 HLVVRCRRTS GGPGCGGGGC GGGGSAVATG AGVGALSLGG AGTDTVLRML GSSAAGGGGG 420 CGGGGGCGGG GGGAAGGGME VFPKYFMAGS LAAGYGCVLV AVITTILIVP SEVEPVYGWI 480 LSYEWGFMLL GLTYGSYLRT CYRWGRRAGH IAALQVPKLH SAPPLPLLET AASAAFLVVS 540 LLLAPWLGEL LGITSFAGTI VATVFIGLGV IVVSTVQFVF LPTQWYLAGR LAGSGPRAA* 600 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00505 | Glyco_transf_8 | 5.0e-8 | 35 | 199 | 199 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| COG5597 | COG5597 | 2.0e-8 | 109 | 202 | 107 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| cd06914 | GT8_GNT1 | 3.0e-10 | 35 | 199 | 174 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| pfam01501 | Glyco_transf_8 | 2.0e-18 | 38 | 286 | 285 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 4.0e-68 | 34 | 288 | 258 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH67224.1 | 0 | 33 | 327 | 33 | 301 | OSIGBa0145M07.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC77645.1 | 0 | 33 | 511 | 33 | 442 | hypothetical protein OsI_16652 [Oryza sativa Indica Group] |
| RefSeq | NP_001146086.1 | 0 | 33 | 334 | 29 | 303 | hypothetical protein LOC100279618 [Zea mays] |
| RefSeq | NP_197349.2 | 0 | 32 | 322 | 29 | 298 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_001784830.1 | 0 | 30 | 590 | 46 | 552 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rmw_A | 2e-19 | 32 | 203 | 3 | 176 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
| PDB | 3rmv_A | 2e-19 | 32 | 203 | 3 | 176 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
| PDB | 3u2x_B | 2e-19 | 32 | 203 | 3 | 176 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
| PDB | 3u2x_A | 2e-19 | 32 | 203 | 3 | 176 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
| PDB | 3u2v_B | 2e-19 | 32 | 203 | 3 | 176 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
