| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20005683m |
| Family | GH125 |
| Protein Properties | Length: 565 Molecular Weight: 62970.1 Isoelectric Point: 6.4132 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2717261 End: 2724455 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH125 | 109 | 508 | 0 |
| ELQALCGRCLHQTITKSVEVRGIGESVFVATGDIPDEWLRDGSVQLSVYLPRLAEHPVLRPIIEGAIRTQAYYILSDPWANSYRKDWVRPDSLGKFERQI GRGGWIATRNFEVDSGAYWLNLLWNYASTEGSLWAAASFLNSSLVHDAAALLVDTWRLEQRHEEASPYRYAELPREGKGALSNYTGMIWSGFRPSDDPNT YGFNIPVNMYAAGSLERLVELNKLVWRDPMLGIAAAKLAEDIRQGIEKFGVVPLPAEKSGSSSSPSTIYAYEVDGLGKALASFDDPNIPSLLSVPLLGYR HYDPEVYGRTRQRILSPANSHYYAGKELRGCGSPHTPHRYVWSLAHCVQGLTSEEPGERADLFRQLLKMQGGNGLMHESNDVDHPGQLTRPLFQWANTML | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MLPRNGATVR RWQHHPLALY LSLAVNAYVL IYVMFHQRTV EKTSTAPADH LLITDYKRAQ 60 LAASQPLFGN AWPSLTGGLP EVWALGTLGA NESFASDVEA NLSPAEREEL QALCGRCLHQ 120 TITKSVEVRG IGESVFVATG DIPDEWLRDG SVQLSVYLPR LAEHPVLRPI IEGAIRTQAY 180 YILSDPWANS YRKDWVRPDS LGKFERQIGR GGWIATRNFE VDSGAYWLNL LWNYASTEGS 240 LWAAASFLNS SLVHDAAALL VDTWRLEQRH EEASPYRYAE LPREGKGALS NYTGMIWSGF 300 RPSDDPNTYG FNIPVNMYAA GSLERLVELN KLVWRDPMLG IAAAKLAEDI RQGIEKFGVV 360 PLPAEKSGSS SSPSTIYAYE VDGLGKALAS FDDPNIPSLL SVPLLGYRHY DPEVYGRTRQ 420 RILSPANSHY YAGKELRGCG SPHTPHRYVW SLAHCVQGLT SEEPGERADL FRQLLKMQGG 480 NGLMHESNDV DHPGQLTRPL FQWANTMLVV YYEQTFGRSC SPYAEALRLQ GVAQREAREN 540 LLPRNGGPDL PAYYDRLEQS IPHV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3538 | COG3538 | 6.0e-105 | 92 | 507 | 427 | + Uncharacterized conserved protein [Function unknown] | ||
| pfam06824 | DUF1237 | 2.0e-118 | 132 | 507 | 388 | + Protein of unknown function (DUF1237). This family contains a number of hypothetical proteins of about 450 residues in length. Their function is unknown, and most are bacterial. However, structurally this family is part of the 6 hairpin glycosidase superfamily, suggesting a glycosyl hydrolase function. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001695184.1 | 0 | 146 | 508 | 1 | 357 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_002183418.1 | 0 | 98 | 564 | 86 | 543 | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] |
| RefSeq | YP_003241779.1 | 0 | 118 | 509 | 35 | 416 | hypothetical protein GYMC10_1689 [Geobacillus sp. Y412MC10] |
| RefSeq | ZP_04852201.1 | 0 | 107 | 511 | 21 | 410 | conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] |
| RefSeq | ZP_05129785.1 | 0 | 109 | 518 | 31 | 429 | conserved hypothetical protein [Clostridium sp. 7_2_43FAA] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2nvp_A | 0 | 106 | 519 | 24 | 427 | A Chain A, X-Ray Crystal Structure Of Protein Cpf_0428 From Clostridium Perfringens. Northeast Structural Genomics Consortium Target Cpr63 |
| PDB | 3qt9_A | 0 | 106 | 519 | 24 | 427 | A Chain A, X-Ray Crystal Structure Of Protein Cpf_0428 From Clostridium Perfringens. Northeast Structural Genomics Consortium Target Cpr63 |
| PDB | 3qt3_A | 0 | 106 | 519 | 24 | 427 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| PDB | 3qsp_B | 0 | 116 | 509 | 31 | 416 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| PDB | 3qsp_A | 0 | 116 | 509 | 31 | 416 | A Chain A, Analysis Of A New Family Of Widely Distributed Metal-Independent Alpha-Mannosidases Provides Unique Insight Into The Processing Of N- Linked Glycans, Clostridium Perfringens Cpe0426 Apo-Structure |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
 | |||||
| Start | End | ||||
| 17 | 36 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FD876592 | 177 | 1 | 177 | 0 |
| CX301593 | 245 | 267 | 508 | 0 |
| FC510600 | 242 | 253 | 466 | 4.00001e-40 |
| CT901924 | 290 | 97 | 363 | 2e-37 |
| GE253657 | 145 | 418 | 561 | 1e-36 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | g9090.t1 | ||||
| Physcomitrella patens | Pp1s2536_2V6.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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