| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20006216m |
| Family | GH5 |
| Protein Properties | Length: 503 Molecular Weight: 56345.6 Isoelectric Point: 4.827 |
| Chromosome | Chromosome/Scaffold: 12 Start: 917830 End: 920716 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 38 | 359 | 9e-28 |
| DGNPWYFQGANAYWLIDFVQTDRGIVDRFFDYCNEFGLEVVRLWAFNHNMPYAWGKYDETEFEGLDYIIDSAGRHNIKLILTLGNTWTAYRSPQDFMRMA GIDPVGKDLLDFYNSPEVLHFYRDHVSAILWRKNTFNGRFYRDDDAIMMYDAMNEPRCPGCTDAISQSAQQAFLRAVASHVRDNAPNQLVALGTEGYFLK SYENYNPGAGARCEGEDWATLSKFDSIDATVVHVYERQMESVPPTWTKCDFDCFCNYMVQYLGVHQRIAADVGKPLIMEEYGLILPAYTAEQRVLLFQLV ADNLHWMKSTGGPMVGAMFWNA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 503 Download |
| MNPSKYHVVF AVVAIALSCL HTAKASFVQR CGHQLCVDGN PWYFQGANAY WLIDFVQTDR 60 GIVDRFFDYC NEFGLEVVRL WAFNHNMPYA WGKYDETEFE GLDYIIDSAG RHNIKLILTL 120 GNTWTAYRSP QDFMRMAGID PVGKDLLDFY NSPEVLHFYR DHVSAILWRK NTFNGRFYRD 180 DDAIMMYDAM NEPRCPGCTD AISQSAQQAF LRAVASHVRD NAPNQLVALG TEGYFLKSYE 240 NYNPGAGARC EGEDWATLSK FDSIDATVVH VYERQMESVP PTWTKCDFDC FCNYMVQYLG 300 VHQRIAADVG KPLIMEEYGL ILPAYTAEQR VLLFQLVADN LHWMKSTGGP MVGAMFWNAA 360 IGNVWDDGYN VYLDASIYKP KPSPVSSTPA LNSVPAAINV TSPSTEAAST SAIDTKPSTE 420 SESAAPEPSR APIYANTETL TDFLRGPQRA ACAEDAAGWW LPTWTAAWMQ TVDMASYRSR 480 CQDLTVLQVL LSSKDALYKT SV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.002 | 38 | 321 | 301 | + Cellulase (glycosyl hydrolase family 5). | ||
| pfam02449 | Glyco_hydro_42 | 0.002 | 57 | 210 | 176 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam01261 | AP_endonuc_2 | 1.0e-5 | 48 | 151 | 109 | + Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae. | ||
| COG3934 | COG3934 | 1.0e-6 | 39 | 243 | 209 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG41070.1 | 0 | 8 | 376 | 14 | 388 | 1,4-beta-D-mannan endohydrolase precursor [Zea mays] |
| RefSeq | NP_171733.2 | 0 | 23 | 376 | 25 | 382 | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_001699837.1 | 6e-25 | 26 | 87 | 40 | 101 | hypothetical protein CHLREDRAFT_141972 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699837.1 | 0 | 169 | 498 | 102 | 374 | hypothetical protein CHLREDRAFT_141972 [Chlamydomonas reinhardtii] |
| RefSeq | XP_002454605.1 | 1.96182e-44 | 23 | 376 | 34 | 390 | hypothetical protein SORBIDRAFT_04g034200 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 2.99878e-43 | 26 | 376 | 5 | 355 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 9e-31 | 26 | 362 | 13 | 346 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 9e-31 | 26 | 362 | 13 | 346 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 9e-31 | 26 | 362 | 13 | 346 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 9e-31 | 26 | 362 | 13 | 346 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
