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Basic Information | |
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Species | Volvox carteri |
Cazyme ID | Vocar20006426m |
Family | GT35 |
Protein Properties | Length: 1010 Molecular Weight: 113499 Isoelectric Point: 7.0434 |
Chromosome | Chromosome/Scaffold: 7 Start: 2549078 End: 2559391 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 278 | 993 | 0 |
ALAELGYDLETLSELERDAALGNGGLGRLAACFLDSMATLNLPAWGYGIRYQYGMFRQTIQNGFQHEQPDYWLTFGNPWEIERLIVQYPIKFYGHVSVVN EEGRQLFRWNAGETVTAVAYDNPIPGFGTRNCINLRLWAAKPSKEFDLEAFNTGDYVAAILSKQRAETLSSVLYPDDRTYEGKELRLKQQHFFVSATIQD CVRRYRDAHPDNNWETFPTKVAFQLNDTHPTIAVAELMRVLMDDHRLGWTKSWEICTKVFAFTNHTVLPEALERWPVPLLEKLLPRHMQIIYDINWRFLQ QVRNKYGDDWERISRMSIIEEGANGEKFVRMAYLAVVASHSVNGVAAIHSEIIKDTIFKDFYDLWPGKFQNKTNGVTQRRWLAFCNPPLRNLITKRLGSD DWILHLDNLKGLRAHADDPEFQAEWREVKQAAKVKAAALIQRLTGVKINTNAMFDIQVKRIHEYKRQLLNVMGIIYRYDQIKKMSREQRKAVVPRVCVIG GKAAPGYEMAKRIIKLVCAVGDKINSDPDVGDLLKLIFVPDYNVSSAEVLIPASELSQHISTAGTEASGTSNMKFTMNGSLIIGTLDGANVEIAEEIGDD NIFIFGAKAHEVPRLRAERRNLRPDDRFNHVISMIRSGYFGWEDYFSPVMDAITTGGDYYLVANDFPAYIDMQAKVDATYRDPAKWTRMSIMGTAGSGKF STDRTIAEYAHDIWHA |
Full Sequence |
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Protein Sequence Length: 1010 Download |
MASALRQGLS APVAAPRTSS GNVPVPVAPA PVLRGKSLVP ARRMVSGPAR SIPAPPQVAA 60 PESPAAQGVV EVFVDNNSDT NFTVINVQAA NKPGLLTAIT ALFRDIGVDV GKAVVDGDEN 120 KINDTFYVRT LTGGKLSDDK AADAVRSLEV LLRSKPSSTG VSRPKFEAQG QGQSGKARLY 180 TLMDTYMKND VLSIQEDIVN HVEYTLARSR VNFDNFEAYQ ATSLSLRDRL IERWNDTQTW 240 FKEKDPKRVY YLSMEFLMGR SLLNTLYNLD IKEAYNEALA ELGYDLETLS ELERDAALGN 300 GGLGRLAACF LDSMATLNLP AWGYGIRYQY GMFRQTIQNG FQHEQPDYWL TFGNPWEIER 360 LIVQYPIKFY GHVSVVNEEG RQLFRWNAGE TVTAVAYDNP IPGFGTRNCI NLRLWAAKPS 420 KEFDLEAFNT GDYVAAILSK QRAETLSSVL YPDDRTYEGK ELRLKQQHFF VSATIQDCVR 480 RYRDAHPDNN WETFPTKVAF QLNDTHPTIA VAELMRVLMD DHRLGWTKSW EICTKVFAFT 540 NHTVLPEALE RWPVPLLEKL LPRHMQIIYD INWRFLQQVR NKYGDDWERI SRMSIIEEGA 600 NGEKFVRMAY LAVVASHSVN GVAAIHSEII KDTIFKDFYD LWPGKFQNKT NGVTQRRWLA 660 FCNPPLRNLI TKRLGSDDWI LHLDNLKGLR AHADDPEFQA EWREVKQAAK VKAAALIQRL 720 TGVKINTNAM FDIQVKRIHE YKRQLLNVMG IIYRYDQIKK MSREQRKAVV PRVCVIGGKA 780 APGYEMAKRI IKLVCAVGDK INSDPDVGDL LKLIFVPDYN VSSAEVLIPA SELSQHISTA 840 GTEASGTSNM KFTMNGSLII GTLDGANVEI AEEIGDDNIF IFGAKAHEVP RLRAERRNLR 900 PDDRFNHVIS MIRSGYFGWE DYFSPVMDAI TTGGDYYLVA NDFPAYIDMQ AKVDATYRDP 960 AKWTRMSIMG TAGSGKFSTD RTIAEYAHDI WHAEPCAVPQ PEASGNGSS* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 195 | 993 | 805 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 198 | 992 | 801 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 278 | 995 | 724 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14986 | PRK14986 | 0 | 180 | 995 | 822 | + glycogen phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 190 | 995 | 817 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016597 | amino acid binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABB88567.1 | 0 | 23 | 1003 | 25 | 1001 | PhoB [Chlamydomonas reinhardtii] |
EMBL | CAL51609.1 | 0 | 74 | 1001 | 55 | 988 | starch phosphorylase 3 (IC) [Ostreococcus tauri] |
GenBank | EEH55145.1 | 0 | 10 | 1004 | 17 | 1015 | glycosyltransferase family 35 protein [Micromonas pusilla CCMP1545] |
RefSeq | XP_001694015.1 | 0 | 23 | 1003 | 25 | 1001 | starch phosphorylase [Chlamydomonas reinhardtii] |
RefSeq | XP_002505241.1 | 0 | 124 | 1001 | 8 | 887 | glycosyltransferase family 35 protein [Micromonas sp. RCC299] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 189 | 997 | 39 | 879 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 189 | 997 | 39 | 879 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3t3i_A | 0 | 190 | 1002 | 23 | 838 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3t3h_A | 0 | 190 | 1002 | 23 | 838 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 3t3g_A | 0 | 190 | 1002 | 23 | 838 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO586252 | 553 | 454 | 1003 | 0 |
HO779924 | 593 | 126 | 703 | 0 |
HO376977 | 448 | 553 | 999 | 0 |
HO417459 | 293 | 609 | 901 | 0 |
HO417459 | 198 | 406 | 599 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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