| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20006483m |
| Family | GT41 |
| Protein Properties | Length: 1248 Molecular Weight: 130229 Isoelectric Point: 6.8659 |
| Chromosome | Chromosome/Scaffold: 7 Start: 2638887 End: 2650253 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 875 | 1211 | 0 |
| IERAVECYSAALAIRPSFPQSLNNLGVVMTAQGRAADALTLLMAAVNGSPTYTEAHNNLGVLQRDVGCIPEALASYSRCLELDPHCRNAGQNRLLALNYI YPGEAELVSSAHREWGELFQSTVQPLPPLGPGDRSRDPDRPLRIGYISPDLFTHSVSYFAEAPLTHHAPGRGYQHFVYSCVPKPDAKTARLRAGTEAAGG VWREVARLSEGELAELVRRDEIDLLVELTGHTANNRLGVMARRPAPVQLTWIGYPNSTGLKAVDYRLTDQVCDPWTTEQTFVEELVRLPGCFLCYTPALD APPVAPPPALANGYITFGSFNNLAKITPQVGRAAVSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1248 Download |
| MPLPSTARTG EGRMEHQRAD QQESPCHLSA LSYDQAPSSS LPAVDGDSPP RRASAAGTVA 60 ANHIHPMKAE EGGLGYINSC AYLAEVAAEP PCCPNGDRSS IDDCVSGAGV VSFSGAFECN 120 GTPCGPQSPG TAKAMRCSDC DHSGRAALPC CVGAPSSWNP LERSATRKTP GAVAPLPQSP 180 LCVEGGERMQ QPHSALLFPA AGNATAVVPA VPPPPSPPQG GGGGVVRTAT AGWPAEVLQR 240 VSAADSPMSP GRVDVPPPPP RPDTPSSFET HSAAAAAVAA GLSHGHEMKS PSSSSRPSRR 300 SHSISAHTSP AQQQQPQPQL DSQPPSPHQQ QQQMRFTPRN HGPQASPGVD SRWPAATAAA 360 AAVAGIAGHP QSWSVQQQQH QLLVSQQQQQ QQLPAAVVAA GLPLLAVPAA ALPYTPWGPV 420 LPAIHVPQAA VAVAAAAVAA GAGVAISPFA TLPLAVAASP AGPTPPEVTA AAAAPGIGQQ 480 SGFGAHQNAV LQLPAAPGGP QAPPPAPAAA PQLTLGSSAD SEALASQCRL AGVLRQSGKA 540 AEALALLDGV LLRQPTNVEA LHLRAQCQQA LGQVQEAMST HLRALALAPD HIPSLTALGA 600 LYQSQGLLGD AVAVYRRSHE LRPDDPTIRV GLAVVLTDQG TKLKNAGAPV AEAVSRYQAA 660 VSLCPNYAPA LYNLGVVAGE LRQGDAALEY YRAAIAAEPR YAQAHCNLGV LLRERGRVVE 720 AVAAYEAALA AAPNFTIVRN NLAIALTDLG THIKNEGRLD EGIALYERAL SYAPRHADAL 780 YNLGVAYGEK GDLQVTVATD AFRSVFTFAT LLPWQQLQSC VPPGAIALLP CAVKHWPGDG 840 RAAFMYEMAL AFNPACAEAQ NNLGVIWKEQ ARDNIERAVE CYSAALAIRP SFPQSLNNLG 900 VVMTAQGRAA DALTLLMAAV NGSPTYTEAH NNLGVLQRDV GCIPEALASY SRCLELDPHC 960 RNAGQNRLLA LNYIYPGEAE LVSSAHREWG ELFQSTVQPL PPLGPGDRSR DPDRPLRIGY 1020 ISPDLFTHSV SYFAEAPLTH HAPGRGYQHF VYSCVPKPDA KTARLRAGTE AAGGVWREVA 1080 RLSEGELAEL VRRDEIDLLV ELTGHTANNR LGVMARRPAP VQLTWIGYPN STGLKAVDYR 1140 LTDQVCDPWT TEQTFVEELV RLPGCFLCYT PALDAPPVAP PPALANGYIT FGSFNNLAKI 1200 TPQVGRAAVS IAGGGCIRLV SLMHSAPGSG RTGNDGRHAT ALVWRSN* 1260 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 2.0e-9 | 530 | 947 | 427 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 3.0e-10 | 530 | 946 | 417 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 7.0e-13 | 519 | 958 | 454 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 2.0e-15 | 518 | 958 | 473 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| COG3914 | Spy | 3.0e-39 | 878 | 1204 | 368 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001694146.1 | 0.000000004 | 526 | 747 | 206 | 426 | O-linked N-acetylglucosamine transferase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001694146.1 | 0 | 528 | 1211 | 28 | 666 | O-linked N-acetylglucosamine transferase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001782948.1 | 0 | 530 | 1211 | 28 | 657 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002308458.1 | 0 | 531 | 1204 | 55 | 675 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530535.1 | 0 | 499 | 1204 | 25 | 676 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 4e-31 | 841 | 1167 | 27 | 386 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 4gz6_D | 1e-16 | 589 | 765 | 6 | 174 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 4gz6_D | 0.00000000007 | 664 | 799 | 5 | 133 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 4gz6_D | 0.0000000006 | 642 | 804 | 17 | 181 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 4gz6_D | 0.000001 | 522 | 656 | 41 | 181 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO867600 | 325 | 846 | 1170 | 0 |
| GT041789 | 359 | 870 | 1223 | 0 |
| GT041789 | 364 | 841 | 1204 | 0 |
| FC335085 | 282 | 928 | 1206 | 0 |
| GO867600 | 126 | 765 | 890 | 0.003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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