| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20008023m |
| Family | GT5 |
| Protein Properties | Length: 705 Molecular Weight: 78134.8 Isoelectric Point: 6.5514 |
| Chromosome | Chromosome/Scaffold: 15 Start: 1691975 End: 1699064 |
| Description | starch synthase 2 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 214 | 697 | 0 |
| NVVMVGAECAPWSKTGGLGDVMAALPKALARRGHRVMVVVPRYENYPNAWETGVRRIYNVFNSQQEVGYFHAYVDGVDYIFVDHSSFHNRGKNIYGGERG EILFRCALLCKAALEAVWHVPCGGITYGDENLCFIANDWHTALLPVYLQAHYRDYGKMTYARCVFVIHNMAHQGRGPFAESSELELNDEYRERMRLYDPI GGEHMNVMKAGLECAHRLVAVSHGYAWECQTPEGGWGLHEVLKVNNWKLRGIVNGIDDQEWNPALDEFLQTDGYRNFTLDTMVEGKRACKMALQKELGLP VDPDAPLLGFIGRLDYQKGVDLIRDTYDYIMGEKCQLVMLGSGRQDLEDALRDMENRNKNQCRGWVGFSVKMAHRITAAADILLMPSRFEPCGLNQLYAM AYGTVPIVHAVGGLRDTVKQYNPYDNVGTGWCFDRAEANKLRESINNALYTYRQFRESFHGIQRRGMEQDLTWDNAASIYEEVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 705 Download |
| MQPSLPTVVM GRSPGLSRTG VSAPTGRLGI TQNSPASVSG RCHRRTHVTY AQEEQRGDNI 60 GDIHRQLLAE IEERRRNQAQ LLDKLNRLAS ETATKSSNGA VAAPDVPAPV PVPVYSTVST 120 GPSSTAAQTF SPPAPSKAPL SPPSPPPKPS VPKPSLVTAP SVPIFEVPTL PLSMESEMYI 180 EPAVPMAEAL PSPAEEQPAA LEKPPPLAGP NVMNVVMVGA ECAPWSKTGG LGDVMAALPK 240 ALARRGHRVM VVVPRYENYP NAWETGVRRI YNVFNSQQEV GYFHAYVDGV DYIFVDHSSF 300 HNRGKNIYGG ERGEILFRCA LLCKAALEAV WHVPCGGITY GDENLCFIAN DWHTALLPVY 360 LQAHYRDYGK MTYARCVFVI HNMAHQGRGP FAESSELELN DEYRERMRLY DPIGGEHMNV 420 MKAGLECAHR LVAVSHGYAW ECQTPEGGWG LHEVLKVNNW KLRGIVNGID DQEWNPALDE 480 FLQTDGYRNF TLDTMVEGKR ACKMALQKEL GLPVDPDAPL LGFIGRLDYQ KGVDLIRDTY 540 DYIMGEKCQL VMLGSGRQDL EDALRDMENR NKNQCRGWVG FSVKMAHRIT AAADILLMPS 600 RFEPCGLNQL YAMAYGTVPI VHAVGGLRDT VKQYNPYDNV GTGWCFDRAE ANKLRESINN 660 ALYTYRQFRE SFHGIQRRGM EQDLTWDNAA SIYEEVLVAA KYQW* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 4.0e-84 | 213 | 701 | 516 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-137 | 213 | 695 | 494 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 7.0e-173 | 213 | 696 | 495 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 214 | 697 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 213 | 700 | 494 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17970.2 | 0 | 141 | 704 | 7 | 576 | soluble starch synthase [Chlamydomonas reinhardtii] |
| GenBank | ACL98480.1 | 0 | 202 | 704 | 272 | 774 | starch synthase IIa-2 precursor [Glycine max] |
| RefSeq | NP_186767.1 | 0 | 116 | 704 | 220 | 792 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q43847 | 0 | 63 | 704 | 77 | 767 | SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase II; Short=GBSS-II; Short=SS II; Flags: Precursor |
| RefSeq | XP_002278470.1 | 0 | 26 | 704 | 68 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 213 | 698 | 10 | 509 | A Chain A, Structure Of A Covalent Intermediate In Thermus Thermophilus Amylomaltase |
| PDB | 3vue_A | 0 | 213 | 698 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 213 | 696 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 213 | 703 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 213 | 703 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO445868 | 438 | 268 | 705 | 0 |
| HO411612 | 417 | 290 | 705 | 0 |
| HO390058 | 413 | 294 | 705 | 0 |
| HO777841 | 309 | 397 | 705 | 0 |
| HO390058 | 32 | 261 | 292 | 2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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