| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20008151m |
| Family | GH114 |
| Protein Properties | Length: 627 Molecular Weight: 67828.8 Isoelectric Point: 5.1584 |
| Chromosome | Chromosome/Scaffold: 15 Start: 326776 End: 333305 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH114 | 304 | 534 | 1.40004e-41 |
| WQWQLSGSDFRPMLRTRPQVIDVDLDMVSTLLSQAAELGITRSSYKLICYFSVGTYEPARVSADSQRGISWSALEQQLGGSAVPGPLYLAYMEPPFSEER WFALDRNDTRNALVNQVMIPRMRSAVAAGCDGIEMDNVDTYDNVPVAAGKRGVTQAQQLAYNAALLDAAHGMRLSAGLKNALDLLSQTFANGRAVATEYD WFLNERCWEYDECDYYGRNIKWDAVVFGVEY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MLPRRSAGAW YPASVLLLVL AGWSHIRTGT AHPCGPEPPG MGVLIPWYIG PWETAAYSKL 60 ASYGSSCSIF AIVIGDSSGP PTNSFSLYTT AFKTLYDSGV QLFGYVHTMA DFGASKARPQ 120 ADVIAEVNSW FDNFGSLLLG IFFDEVVANT VNVNAVTYYG ALANAVYSRN SSARVVFNPG 180 TKIGCTLAGL SDVYVRYENY ASAWAGDYAA GAICDCPTQS SCAMMLHGQS SATALPQLVN 240 QAASRSFSYI YVTDDVMPNP WDTLATYFDT FMGIVAPAAP SSSPPPPLPS SPSSIWRPSG 300 VLRWQWQLSG SDFRPMLRTR PQVIDVDLDM VSTLLSQAAE LGITRSSYKL ICYFSVGTYE 360 PARVSADSQR GISWSALEQQ LGGSAVPGPL YLAYMEPPFS EERWFALDRN DTRNALVNQV 420 MIPRMRSAVA AGCDGIEMDN VDTYDNVPVA AGKRGVTQAQ QLAYNAALLD AAHGMRLSAG 480 LKNALDLLSQ TFANGRAVAT EYDWFLNERC WEYDECDYYG RNIKWDAVVF GVEYCDSRKM 540 FGTGSRNLRP ECVCPLANGP TPGAATTPRP TLNWLIKNVN LNAVGFDCRE YCARPGVTCT 600 APAGGNVGLC AMNSPNNICP LYNVSR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3868 | COG3868 | 2.0e-7 | 298 | 516 | 219 | + Uncharacterized conserved protein [Function unknown] | ||
| pfam03537 | DUF297 | 2.0e-18 | 304 | 534 | 240 | + TM1410 hypothetical-related protein. | ||
| pfam12138 | Spherulin4 | 3.0e-20 | 41 | 275 | 258 | + Spherulation-specific family 4. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEY67008.1 | 4e-23 | 296 | 534 | 20 | 217 | conserved hypothetical protein [Phytophthora infestans T30-4] |
| RefSeq | XP_001691221.1 | 0 | 24 | 610 | 3 | 500 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | YP_001614713.1 | 2e-24 | 295 | 588 | 299 | 531 | hypothetical protein sce4070 [Sorangium cellulosum 'So ce 56'] |
| RefSeq | ZP_01461186.1 | 2e-24 | 296 | 589 | 83 | 315 | endo alpha-1,4 polygalactosaminidase precusor [Stigmatella aurantiaca DW4/3-1] |
| RefSeq | ZP_01899039.1 | 2e-22 | 294 | 516 | 74 | 255 | putative endo alpha-1,4 polygalactosaminidase precusor [Moritella sp. PE36] |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
| Start | End | ||||
| 7 | 26 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
| Cleavage Site | |||||
| 31 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD817838 | 232 | 396 | 627 | 0 |
| FD823265 | 193 | 1 | 193 | 0 |
| FD804459 | 163 | 295 | 457 | 0 |
| FD907003 | 89 | 539 | 627 | 2e-40 |
| EH789108 | 304 | 304 | 604 | 2e-18 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre06.g307650.t1.3 | Cre06.g307650.t2.1 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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