| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20011098m |
| Family | CBM47 |
| Protein Properties | Length: 444 Molecular Weight: 48455 Isoelectric Point: 7.9245 |
| Chromosome | Chromosome/Scaffold: 43 Start: 852692 End: 855642 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM47 | 60 | 197 | 8.6e-21 |
| YYQRGNTYDPGYAVDGVTEYPSPLDKYNVSLFSSKISDSTPWISVDLGAVALVKRVVIINRRDCCQDQLRNAELRIGNVSITNAAGGGDTRNITGNPLVW QQDAGTYINASATIPFDTPKVGRWVTLQIKQPTLHITE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 444 Download |
| MERRKAASSC WEGDWYTSSA LMARLPLMLV AALMMATCAT GDDDLPNLAL RQAVYASSVY 60 YQRGNTYDPG YAVDGVTEYP SPLDKYNVSL FSSKISDSTP WISVDLGAVA LVKRVVIINR 120 RDCCQDQLRN AELRIGNVSI TNAAGGGDTR NITGNPLVWQ QDAGTYINAS ATIPFDTPKV 180 GRWVTLQIKQ PTLHITEIQV FGYYAASAVC ANVLPGTTYG TEASTITILK MQSSGDCCSA 240 CSVNPDCRYW VFRRCKNTCT LKRDEGAGPG FFIDEKTVAG GVRPVALFGT PRVAIWRYKS 300 FVDPEAQWIW SRGSAAQFLD GVPENPPTTF SYVYRAASAV TANISVGTNS NAWIYINGMQ 360 MNTSIDYFGI FISSLSVTLQ KGPNLIQILV QNTFDGSSAG VVMSFRNSSG RVLARSNASW 420 VWSERAIIED RVCVQPQQFN CLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14295 | PAN_4 | 0.0004 | 233 | 262 | 32 | + PAN domain. | ||
| pfam00754 | F5_F8_type_C | 0.0001 | 57 | 194 | 138 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
| smart00607 | FTP | 3.0e-6 | 47 | 201 | 163 | + eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF76636.1 | 0.000000000003 | 47 | 203 | 99 | 253 | tachylectin-4 [Tachypleus tridentatus] |
| RefSeq | NP_001077343.1 | 0.000000000004 | 22 | 249 | 1 | 198 | hypothetical protein LOC799904 [Danio rerio] |
| RefSeq | NP_001077343.1 | 0.00000000002 | 47 | 201 | 167 | 304 | hypothetical protein LOC799904 [Danio rerio] |
| RefSeq | XP_001692660.1 | 0.000000000007 | 69 | 207 | 359 | 490 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_002739972.1 | 0.000000005 | 16 | 202 | 491 | 660 | PREDICTED: UNCoordinated family member (unc-105)-like, partial [Saccoglossus kowalevskii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cqo_C | 0.000001 | 44 | 208 | 2 | 151 | A Chain A, Crystal Structure Of A F-Lectin (Fucolectin) From Morone Saxatilis (Striped Bass) Serum |
| PDB | 3cqo_B | 0.000001 | 44 | 208 | 2 | 151 | A Chain A, Crystal Structure Of A F-Lectin (Fucolectin) From Morone Saxatilis (Striped Bass) Serum |
| PDB | 3cqo_A | 0.000001 | 44 | 208 | 2 | 151 | A Chain A, Crystal Structure Of A F-Lectin (Fucolectin) From Morone Saxatilis (Striped Bass) Serum |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 41 | |||||
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GT033236 | 164 | 47 | 204 | 0.000001 |
| DV100301 | 116 | 91 | 202 | 0.012 |
| DV101342 | 116 | 91 | 202 | 0.012 |
| DV100386 | 116 | 91 | 202 | 0.02 |
| GT033236 | 79 | 47 | 125 | 0.16 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Volvox carteri | Vocar20002885m | Vocar20011161m | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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