CAZyme Information

Basic Information
SpeciesVolvox carteri
Cazyme IDVocar20012173m
FamilyGH13
Protein PropertiesLength: 591 Molecular Weight: 65124.3 Isoelectric Point: 7.0476
ChromosomeChromosome/Scaffold: 53 Start: 40466 End: 49906
Descriptionstarch branching enzyme 2.1
View CDS
External Links
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH131324497.6e-34
  QGTLAAATSRLEHVASLGFTAVQLMPISEHSDAWGYNPRLLMALHGAYGTPDDLRRFVDKAHSLGLGVIIDVVLHHGAVDGNSLWEYDGWGPDWNGGIYH
  EGGHDTQWGRGFAFWKREVLAMAEAACATWLCDFRCDGLRFDSANDLPREAIQYLTWSLRQRFPGRILTAEVTPENPQSVHELGFDSVWVHSGYFDIIQQ
  HRALGRGHHGGGDWAAGWDLPRLRTVMALHPGFTSPTQCIKYLLGSHDQVGCRNGGAWYKDYEMIGGQHRYAVDQYGGGRGDWSARASSRLWYTANVAAA
  GLPMMFMGTEFAQSGWWD
Full Sequence
Protein Sequence     Length: 591     Download
MIQFGNTQVT LSQPPRLLWA YNKRAKTGQA HFSGPPRFEC RQSLRLHRAH APTYLPTMAA    60
FPSAAVDPVT GQAGPTSRSI QNPQVFTLAP QLLAASPFPD CPHGATLMSE AGREVSFKVW    120
APHAASVSLL LQGTLAAATS RLEHVASLGF TAVQLMPISE HSDAWGYNPR LLMALHGAYG    180
TPDDLRRFVD KAHSLGLGVI IDVVLHHGAV DGNSLWEYDG WGPDWNGGIY HEGGHDTQWG    240
RGFAFWKREV LAMAEAACAT WLCDFRCDGL RFDSANDLPR EAIQYLTWSL RQRFPGRILT    300
AEVTPENPQS VHELGFDSVW VHSGYFDIIQ QHRALGRGHH GGGDWAAGWD LPRLRTVMAL    360
HPGFTSPTQC IKYLLGSHDQ VGCRNGGAWY KDYEMIGGQH RYAVDQYGGG RGDWSARASS    420
RLWYTANVAA AGLPMMFMGT EFAQSGWWDV VPDRRLQWSL STDEVGTHSK ALVAGANELR    480
NRFPALRRGW ANILHEDRAN GVVAFERVIE GETRLVAVIN AGRKSWLGGD YGVWVGQAAG    540
QLEEVFCSQA TEFGGNVESG RANNEPRAMY DGKIWINLPD QCTLVFQHTL *             600
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR02402trehalose_TreZ5.0e-30133518466+
cd11350AmyAc_42.0e-32132489396+
COG0296GlgB2.0e-42133566484+
cd11325AmyAc_GTHase1.0e-61132448346+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005975carbohydrate metabolic process
GO:0043169cation binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAU01394.10139587428859putative 1,4-alpha-glucan branching enzyme 2 [Toxoplasma gondii]
RefSeqXP_001694399.10.00038313182129predicted protein [Chlamydomonas reinhardtii]
RefSeqXP_001694399.10134590221626predicted protein [Chlamydomonas reinhardtii]
RefSeqXP_002367056.101415874598881,4-alpha-glucan branching enzyme, putative [Toxoplasma gondii ME49]
RefSeqXP_627714.101425551895981,4-alpha-glucan branching enzyme; alpha-amylase; glycogen brancing enzyme [Cryptosporidium parvum Iowa II]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3m07_A2e-23132294150306A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium
PDB1eha_A4e-209944675423A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus
PDB3vgb_A8e-209944675423A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus
PDB1eh9_A8e-209944675423A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase
PDB3vgh_A2e-199944675423A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FD8340002403525910
FD9315742223705910
HO4154173631535150
GW5934952363525870
BU6498731651282920
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_066_00053.1Aquca_027_00415.5Aquca_027_00415.4Aquca_027_00415.3Aquca_027_00415.2
Aquca_027_00415.1Aquca_015_00400.6Aquca_015_00400.5Aquca_015_00400.2Aquca_015_00400.1
Aquca_015_00400.3Aquca_015_00400.4
Arabidopsis lyrata873536321348908239
Arabidopsis thalianaAT3G20440.3AT3G20440.2AT2G36390.1AT5G03650.1
Brachypodium distachyonBradi1g41970.2Bradi1g41970.1Bradi1g29850.2Bradi1g29850.1Bradi5g09170.2
Bradi5g09170.1Bradi3g44760.1
Brassica rapaBra035782Bra005269Bra017241Bra009521
Carica papayaevm.model.supercontig_5.62
Capsella rubellaCarubv10012936mCarubv10022617mCarubv10000235m
Chlamydomonas reinhardtiiCre06.g270100.t1.3Cre10.g444700.t1.1Cre06.g289850.t1.3Cre08.g373450.t1.1
Citrus clementinaCiclev10007401mCiclev10011063mCiclev10000406mCiclev10000374mCiclev10000272m
Ciclev10000256m
Citrus sinensisorange1.1g035501morange1.1g002609morange1.1g004765morange1.1g004253morange1.1g003474m
orange1.1g003390morange1.1g003230morange1.1g003226m
Cucumis sativusCucsa.378410.2Cucsa.378410.1Cucsa.077550.3Cucsa.077550.1Cucsa.077550.2
Eucalyptus grandisEucgr.F03487.1Eucgr.A01533.1Eucgr.F01770.1
Fragaria vescamrna30233.1-v1.0-hybridmrna08644.1-v1.0-hybridmrna08646.1-v1.0-hybrid
Glycine maxGlyma18g10385.1Glyma03g35020.2Glyma03g35020.1Glyma19g37750.2Glyma19g37750.1
Glyma04g01950.2
Gossypium raimondiiGorai.009G406400.4Gorai.011G196000.5Gorai.011G196000.4Gorai.011G196000.3Gorai.011G196000.2
Gorai.011G196000.12Gorai.011G196000.1Gorai.011G196000.7Gorai.011G196000.6Gorai.011G196000.13
Gorai.002G172100.7Gorai.002G172100.5Gorai.002G172100.3Gorai.002G172100.2Gorai.002G172100.1
Gorai.009G441800.2Gorai.009G441800.1Gorai.009G406400.6Gorai.009G406400.5Gorai.009G406400.3
Gorai.009G406400.2Gorai.009G406400.1Gorai.002G241400.7Gorai.002G241400.6Gorai.002G241400.5
Gorai.002G241400.4Gorai.002G241400.2Gorai.002G241400.1Gorai.005G113800.3Gorai.005G113800.2
Gorai.005G113800.1
Linum usitatissimumLus10000912Lus10023878Lus10014382Lus10016012Lus10012264
Malus domesticaMDP0000218396MDP0000148418MDP0000214735MDP0000177786
Manihot esculentacassava4.1_006199mcassava4.1_004366mcassava4.1_003773mcassava4.1_001701mcassava4.1_001686m
cassava4.1_002337mcassava4.1_002172mcassava4.1_002171mcassava4.1_001826mcassava4.1_001598m
cassava4.1_001595m
Medicago truncatulaMedtr7g104080.1
Mimulus guttatusmgv1a001162mmgv1a001301mmgv1a001932m
Oryza sativaLOC_Os02g32660.2LOC_Os06g26234.3LOC_Os06g26234.2LOC_Os06g26234.1LOC_Os02g32660.1
LOC_Os06g51084.8LOC_Os06g51084.7LOC_Os06g51084.6LOC_Os06g51084.5LOC_Os06g51084.4
LOC_Os06g51084.3LOC_Os06g51084.2LOC_Os06g51084.1
Panicum virgatumPavirv00035568mPavirv00058932mPavirv00002278mPavirv00067040mPavirv00061484m
Pavirv00061483mPavirv00061485m
Physcomitrella patensPp1s200_23V6.1Pp1s15_181V6.2Pp1s15_181V6.1Pp1s54_189V6.2Pp1s54_189V6.1
Pp1s64_78V6.1
Phaseolus vulgarisPhvul.006G047000.1Phvul.001G187600.1Phvul.009G011000.1
Picea abiesMA_10430611g0010
Populus trichocarpaPotri.006G115100.5Potri.001G359200.1Potri.006G115100.6Potri.006G115100.4Potri.006G115100.3
Potri.006G115100.2Potri.006G115100.1Potri.005G251000.5Potri.005G251000.4Potri.005G251000.3
Potri.005G251000.2Potri.005G251000.1Potri.005G251000.6
Prunus persicappa016544mppa001312mppa001929m
Ricinus communis29762.m00048630170.m01435927496.m000095
Setaria italicaSi008087mSi016350mSi009379mSi009312mSi005911m
Si006006mSi006081m
Selaginella moellendorffii165481437348437417
Sorghum bicolorSb03g027310.1Sb04g021540.1Sb06g015360.1Sb10g030776.1
Thellungiella halophilaThhalv10020019mThhalv10016249mThhalv10012785mThhalv10012784mThhalv10012679m
Vitis viniferaGSVIVT01037695001GSVIVT01033801001GSVIVT01008673001
Volvox carteriVocar20015251mVocar20002436mVocar20007338m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)