| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_000719m |
| Family | GT5 |
| Protein Properties | Length: 1062 Molecular Weight: 120138 Isoelectric Point: 5.1046 |
| Chromosome | Chromosome/Scaffold: 06582 Start: 142219 End: 150976 |
| Description | starch synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 565 | 1049 | 0 |
| VVHIAAEMAPVAKVGGLGDVVTGLGKALQKRGHLVEIILPKYDCMQYDGIGNLRALDVVLESYFDGKLYKNEVWVGTIEGLPVYFIEPHHPGKFFWRGQF YGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGSAPASELASCGLDVQQLNRPDRMQDNSAHD RINPIKGAVVFSNIVTTVSPTYAQEVRTSEGGKGLHSTLNFHAKKFIGILNGIDTDVWNPATDTLLEVQYNANDLQGKAENKIATRQHLGLSTADARQPL VGCITRLVPQKGVHLIRHAIYRTLELGGQFLLLGSSPVAHIQREFEGIANHFQNHEHIRLVLKYDESLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGS IPIARKTGGLNDSVFDVDDDTIPLQFRNGYTFLNPDEQGVNSALERAFNHYRNDPESWQQLVQRDMDIDFSWESSASQYEELYSK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1062 Download |
| MASKLSTWFL SQGFTALNYN FDTNKQTATR FLLPSHRLLP ASCKMRQRNL SSSQHKRQQL 60 KKASPEQPPN TVGFHSRGGG GGDDIGDDDN DSETESTAVH SVPSLNLDVE SNEEVVDVSV 120 DVEHAQHTGA NDVERNVDME HVQDVGAKDL YSLTQEMKTL GIDGAEKLSS IPDEMKPLVL 180 NKDGGEQLSS FQLEDLIGMI RNAEKNILLL NQARVHALED LERILAEKEI LQGEINVLEM 240 KLAETDARMK VAAQEKMHVE LMEDQLGKLR NELAYRVGNQ NKLLNEEAPL IQDSTIQNIS 300 EELNSLRAEN TSLRTDIEAL KRELSNVKDT DERVITLEKE CMQLESSVKD LESKLSVSQE 360 DVSKLSSLKV ECKDLWEKVG SLQALLDKAT KQADQAILVL QQNRDLWKKV DKLEESLEEA 420 NVYKLSSEKL QQYNELMQQK IKLLEERLQQ SDEEIYSYVQ LYQESIQEFQ DTLNTLKEES 480 KKKALDEPVD DMPWQFWSHL LLMIDGWLLE KKLTLDDAKL LRDMVWKRER RIHDIYLECK 540 EKNEHEAVSM FLKLTSSPKS QGLYVVHIAA EMAPVAKVGG LGDVVTGLGK ALQKRGHLVE 600 IILPKYDCMQ YDGIGNLRAL DVVLESYFDG KLYKNEVWVG TIEGLPVYFI EPHHPGKFFW 660 RGQFYGEHDD FKRFSFFSRA ALELLLQAGK KPDIIHCHDW QTAFVAPLYW DIYAPKGLNS 720 ARICFTCHNF EYQGSAPASE LASCGLDVQQ LNRPDRMQDN SAHDRINPIK GAVVFSNIVT 780 TVSPTYAQEV RTSEGGKGLH STLNFHAKKF IGILNGIDTD VWNPATDTLL EVQYNANDLQ 840 GKAENKIATR QHLGLSTADA RQPLVGCITR LVPQKGVHLI RHAIYRTLEL GGQFLLLGSS 900 PVAHIQREFE GIANHFQNHE HIRLVLKYDE SLAHSIYAAS DMFIIPSIFE PCGLTQMIAM 960 RYGSIPIARK TGGLNDSVFD VDDDTIPLQF RNGYTFLNPD EQGVNSALER AFNHYRNDPE 1020 SWQQLVQRDM DIDFSWESSA SQYEELYSKS VARARAAASR S* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 3.0e-139 | 559 | 1047 | 496 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 1 | 1051 | 1051 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 563 | 1050 | 494 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 565 | 1049 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 0 | 563 | 1049 | 489 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA16796.1 | 0 | 1 | 1061 | 1 | 1071 | starch synthase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_193558.3 | 0 | 1 | 1061 | 1 | 1040 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 1058 | 1 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 170 | 1060 | 9 | 887 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519725.1 | 0 | 375 | 1061 | 312 | 998 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0 | 565 | 1054 | 3 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 565 | 1054 | 3 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 565 | 1054 | 3 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0 | 565 | 1054 | 3 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3d1j_A | 0 | 565 | 1049 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 638 | 970 | 0 |
| CF828776 | 286 | 688 | 973 | 0 |
| GW865616 | 298 | 669 | 966 | 0 |
| DV124304 | 258 | 627 | 884 | 0 |
| EG664148 | 265 | 590 | 854 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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