| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_000744m |
| Family | GT4 |
| Protein Properties | Length: 1052 Molecular Weight: 118089 Isoelectric Point: 6.4917 |
| Chromosome | Chromosome/Scaffold: 00847 Start: 1549109 End: 1555003 |
| Description | sucrose phosphate synthase 2F |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 472 | 640 | 0 |
| SNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSTNASYLLSIIKLIDKYDLYGHVAYPKHHKQSDVPNIYRLAAKTKGV FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALLKLVSDKQLWAR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1052 Download |
| MSGNDWINSY LEAILDVDPG LDYKKSSLLL RERGRFSPTR YFVEEVITGF DETDLHRSWI 60 RAAAMRSTQE RNTRLENMCW RIWNLARKKK RLEGEEVQRK AKRHIERERG RKEATADMSE 120 DLSEGERGDV HGEILSHGGS VRGRMPRISS VDVMENWAKQ HKEKKLYIVL ISLHGLIRGE 180 NMELGRDSDT GGQVKYVVEL ARALGTTPGV YRVDLLTRQV SAPDVDWSYA EPTEMLNLIN 240 SENSMQEHGE SSGAYIIRIP FGPKDKYIQK ELLWPYIPEF VDGALNHIIQ MSRVLGEQIG 300 SGNPVWPVAI HGHYADAGDS AALLSGALNV PMVFTGHSLG RDKLEQLLKQ GRQSREEINA 360 TYKIMRRIEA EELTLDASEI IITSTRQEIE EQWRLYDGFD PVLERKLRAR IKRGVSCHGR 420 FMPRMIVIPP GMEFHHIIPH DADMDGEDEE KFEDSPAAPD PPIWSEIMRF FSNPRKPMIL 480 ALARPDPKKN ITTLVKAFGE CRPLRELANL TLIMGNRDDI DEMSSTNASY LLSIIKLIDK 540 YDLYGHVAYP KHHKQSDVPN IYRLAAKTKG VFINPAFIEP FGLTLIEAAA HGLPIVATKN 600 GGPVDIHRVL DNGLLVDPHD QQSIADALLK LVSDKQLWAR CRQNGLKNIH LFSWPEHCKT 660 YLARIASCRP RQPQWQRSED GLRNEESDSP GDSLRDIKDL SLKLSLDGDK NESGNLDNSL 720 DTEENASDRK NVLGNNALTL SKDAIRGAQN ESIEKADNNI CSSKFPSPRK RKYIFVIAVD 780 GDTTSDSLEA IKIVVEVGMK ETSIGFILST SMTISEVYSL LASGGLSPLD FDAFICNSGS 840 EVYYPSSSNG DTTGLPFVLD LDYHSHIEYH WGGEGLRRTL VRWAASINDK HGQEQIVVED 900 ESGSTAHCCA FKVKEPSMIP SFRELRKLMR IQGLRGHVIY CQNGSKINVI PVLASRSQAL 960 RYLYIRWGAD LSKFVIFVGE CGDTDYEGLL GGIHKSVILK GVGSNARKLH ADRSYPLEDV 1020 TPFDSPNVVQ SEGCNVNDIK QSLEKLGVLK V* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00142 | PLN00142 | 7.0e-32 | 168 | 650 | 538 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 1.0e-46 | 168 | 663 | 537 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03800 | GT1_Sucrose_synthase | 3.0e-143 | 167 | 663 | 498 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02472 | sucr_P_syn_N | 7.0e-172 | 166 | 665 | 504 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 1 | 1047 | 1059 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI25540.1 | 0 | 1 | 1050 | 1 | 1031 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265473.1 | 0 | 1 | 1050 | 1 | 1051 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002282808.1 | 0 | 1 | 1051 | 1 | 1058 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324874.1 | 0 | 1 | 1050 | 1 | 1053 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515487.1 | 0 | 1 | 1050 | 1 | 1023 | sucrose phosphate syntase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 0 | 189 | 672 | 31 | 463 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 2r66_A | 0 | 189 | 672 | 31 | 463 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 2r60_A | 0 | 189 | 672 | 31 | 463 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 2e-33 | 168 | 654 | 281 | 755 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 2e-33 | 168 | 654 | 281 | 755 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO780468 | 433 | 1 | 433 | 0 |
| HO796578 | 425 | 162 | 581 | 0 |
| HO796578 | 85 | 559 | 643 | 1.99965e-42 |
| HO796578 | 25 | 652 | 676 | 1.99965e-42 |
| HO796578 | 70 | 51 | 120 | 0.000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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