| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001222m |
| Family | GT41 |
| Protein Properties | Length: 927 Molecular Weight: 102798 Isoelectric Point: 5.9487 |
| Chromosome | Chromosome/Scaffold: 02892 Start: 202231 End: 212439 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 363 | 852 | 0 |
| IKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNIAMAINAYEQCLKIDPDSRNAGQNRLLAMNYIDEGHDDKLFEAHR EWGRRFMRLYSQYTSWDNPKDPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYANYKVVVYSAVVKADAKTNRFKEKVLKKGGLWKDIYGIDEKKVASMV REDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSQADPPDTKQKHVEELVRLPECFLCYTPSPEAGPVCSAPALANGFITF GSFNNLAKITPKVLQVWARILSAVPNSRLVVKCKPFCCDSVRQRFLSTLEELGLESLRIDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMG VPCVTMGGAVHAHNVGVSLLSKVGLGHLVAKDEDEYVRLALQLALDIPALANLRTSLRDLMLKSPVCDGPNFALGLESTYRNMWRRYCKG | |||
| Full Sequence |
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| Protein Sequence Length: 927 Download |
| MAWTEKNNGN GREQGSIGDN GFLKGSQPSP SASGSPVGIT APLKVFEGKD DLSYANILRS 60 RNKFVDALAI YECVLEKDSG NVEAHIGKGI CLQMQNMGRL AFDSFAEAVR MDPQNACALT 120 HCGMLFKDEG RLVEAAESYQ KALRADPSYK PAAECLAIVL TDLGTSLKLS GNTQEGIQKY 180 YEALRIDPHY APAYYNLGVV YSEMMQYDTA LNCYEKAALE RPMYAEAYCN MGVIYKNRGD 240 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGIAYYK KALYYNWHYA 300 DAMYNLGVAY GEMLKFDMAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL DKAVECYQMA 360 LSIKPNFSQS LNNLGVVYTV QGKMDAAASM IEKAIMANPT YAEAYNNLGV LYRDAGNIAM 420 AINAYEQCLK IDPDSRNAGQ NRLLAMNYID EGHDDKLFEA HREWGRRFMR LYSQYTSWDN 480 PKDPERPLVI GYVSPDYFTH SVSYFIEAPL VYHDYANYKV VVYSAVVKAD AKTNRFKEKV 540 LKKGGLWKDI YGIDEKKVAS MVREDKVDIL VELTGHTANN KLGMMACRPA PVQVTWIGYP 600 NTTGLPTIDY RITDSQADPP DTKQKHVEEL VRLPECFLCY TPSPEAGPVC SAPALANGFI 660 TFGSFNNLAK ITPKVLQVWA RILSAVPNSR LVVKCKPFCC DSVRQRFLST LEELGLESLR 720 IDLLPLILLN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMGG AVHAHNVGVS 780 LLSKVGLGHL VAKDEDEYVR LALQLALDIP ALANLRTSLR DLMLKSPVCD GPNFALGLES 840 TYRNMWRRYC KGDVPSLKRM ELLQEGISET SPIKNSEPTS IPFSVEGPPE SVKANGFIAV 900 PSSTVNHSCE ENGSCSRLNH TSDKLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 2.0e-20 | 61 | 434 | 376 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 8.0e-21 | 108 | 447 | 343 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 4.0e-21 | 63 | 456 | 428 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| TIGR02917 | PEP_TPR_lipo | 9.0e-24 | 52 | 434 | 418 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| COG3914 | Spy | 8.0e-82 | 317 | 849 | 562 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0042802 | identical protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | O82039 | 0 | 1 | 913 | 1 | 919 | SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY |
| RefSeq | XP_002281883.1 | 0 | 1 | 913 | 1 | 912 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308458.1 | 0 | 1 | 926 | 1 | 934 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323412.1 | 0 | 1 | 908 | 1 | 913 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530535.1 | 0 | 1 | 923 | 1 | 925 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w3b_B | 2e-36 | 108 | 409 | 59 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 5e-32 | 110 | 441 | 27 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 9e-27 | 56 | 375 | 75 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 6e-18 | 56 | 313 | 143 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.0000000000009 | 52 | 240 | 207 | 388 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DY295408 | 401 | 430 | 827 | 0 |
| GO867600 | 331 | 321 | 651 | 0 |
| GT041789 | 337 | 345 | 681 | 0 |
| GO867600 | 142 | 139 | 278 | 0.00000000000004 |
| GO867600 | 140 | 248 | 385 | 0.0000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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