| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001390m |
| Family | GT41 |
| Protein Properties | Length: 888 Molecular Weight: 98462.3 Isoelectric Point: 5.6791 |
| Chromosome | Chromosome/Scaffold: 11279 Start: 24516 End: 36455 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 365 | 817 | 0 |
| PNFSQSLNNLGVVYTVQGKMDSAASMIEKAIMANPTYAEAYNNLGVLYRDAGNITMAINAYEQCLKIDPDSRNAGQNRLLAMNYIDEGHDDKLFEAHRDW GRRFMRLYPQYTSWDNPKDPERPLVIGYADAKTNRFREKVLKKGGVWRDIYGVDEKKVASMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYP NTTGLPTIDYRITDSLADPLDTKQKHVEELARLPECFLCYTPSPEAGPVSPTPALANGFVTFGSFNNLAKITPKVLRVWARILCAVPNSRLVVKCKPFCC DSIRQRFLTTLEELGLESLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVAMAGAVHAHNVGVSLLSKVGLGHLIAKNEDEYVQ LALQLASDIPELSNLRMSLRDLMSKSPVCDGPNFILGLESTYRKMWHRYCKDD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 888 Download |
| MAWTEKDIGN GREQVPTGDN GFLKGSQPSP CATGSPVGVA AVPKGFEGKE TLSYANILRS 60 RNKFVDALAI YQSVLDKDSG NVEAHIGKGI CLQMQNMGRL AFDSFSEAVK LDPQNACALM 120 HCGILYKDQG QLVEAAESYQ KALRADPSYK PAAECLAIVL TDLGTSLKIS GNTQEGIQKY 180 YEALKIDPHY APAYYNLGVV YSEMMQYDTA LNCYEKAALE RPMYAEAYCN MGVIYKNRGD 240 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DIDQGIAYYK KALYYNWHYA 300 DAMYNLGVAY GEMLKFDKAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL DKAVECYQTA 360 LSIKPNFSQS LNNLGVVYTV QGKMDSAASM IEKAIMANPT YAEAYNNLGV LYRDAGNITM 420 AINAYEQCLK IDPDSRNAGQ NRLLAMNYID EGHDDKLFEA HRDWGRRFMR LYPQYTSWDN 480 PKDPERPLVI GYADAKTNRF REKVLKKGGV WRDIYGVDEK KVASMVREDK VDILVELTGH 540 TANNKLGMMA CRPAPVQVTW IGYPNTTGLP TIDYRITDSL ADPLDTKQKH VEELARLPEC 600 FLCYTPSPEA GPVSPTPALA NGFVTFGSFN NLAKITPKVL RVWARILCAV PNSRLVVKCK 660 PFCCDSIRQR FLTTLEELGL ESLRVDLLPL ILLNHDHMQA YSLMDISLDT FPYAGTTTTC 720 ESLYMGVPCV AMAGAVHAHN VGVSLLSKVG LGHLIAKNED EYVQLALQLA SDIPELSNLR 780 MSLRDLMSKS PVCDGPNFIL GLESTYRKMW HRYCKDDVPS LKRIEQLREQ GFSEAAPIKN 840 SEPTSIPLSL EGPPESVKEN GFNAVPSSTA NHSSEENGSQ SVESDFR* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0457 | NrfG | 4.0e-6 | 47 | 156 | 111 | + FOG: TPR repeat [General function prediction only] | ||
| COG0457 | NrfG | 9.0e-18 | 204 | 475 | 280 | + FOG: TPR repeat [General function prediction only] | ||
| COG0457 | NrfG | 4.0e-24 | 177 | 444 | 276 | + FOG: TPR repeat [General function prediction only] | ||
| COG0457 | NrfG | 1.0e-24 | 95 | 378 | 289 | + FOG: TPR repeat [General function prediction only] | ||
| COG3914 | Spy | 5.0e-76 | 317 | 813 | 546 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0042802 | identical protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAX46402.1 | 0 | 1 | 878 | 1 | 915 | putative SPINDLY protein [Rosa luciae] |
| RefSeq | XP_002281883.1 | 0 | 1 | 878 | 1 | 912 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308458.1 | 0 | 1 | 880 | 1 | 923 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323412.1 | 0 | 1 | 873 | 1 | 913 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530535.1 | 0 | 1 | 881 | 1 | 918 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1w3b_B | 4e-39 | 89 | 409 | 41 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 7e-32 | 110 | 441 | 27 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 2e-22 | 56 | 346 | 75 | 385 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 1e-18 | 56 | 313 | 143 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| PDB | 1w3b_B | 0.0000000000001 | 52 | 240 | 207 | 388 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781209 | 366 | 457 | 817 | 0 |
| HO781209 | 100 | 393 | 492 | 0 |
| DY295408 | 401 | 430 | 791 | 0 |
| HO781209 | 75 | 214 | 285 | 0.0003 |
| HO781209 | 58 | 330 | 385 | 3.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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