| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001635m |
| Family | GH35 |
| Protein Properties | Length: 845 Molecular Weight: 94979.6 Isoelectric Point: 6.4012 |
| Chromosome | Chromosome/Scaffold: 02421 Start: 697039 End: 714975 |
| Description | beta galactosidase 9 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 1 | 296 | 0 |
| MLISGGIHYPRATPEMWPDLIAKSKEGGLDVIQTYVFWNGHEPVKGQYFFEGRYDLVKFVKLVGGSGLYLHLRIGPYVCAEWNFGGFPVWLRDIPGIVFR TNNDPFKEEMQRFVKKIVDLMREEMLFSWQGGPIIMLQIENEYGNIEHSFGPEGREYVKWAARMALGLGAGVPWIMCRQTDAPENIIDACNAYYCDGYKP NSHNKPIFWTEDWDGWYTTWGGSLPHRPVEDLAFAVARFFERGGSFQNYYMYFGGTNFGRTAGGPFYITSYDYDAPIDEYGLLSEPKWGHLKDLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 845 Download |
| MLISGGIHYP RATPEMWPDL IAKSKEGGLD VIQTYVFWNG HEPVKGQYFF EGRYDLVKFV 60 KLVGGSGLYL HLRIGPYVCA EWNFGGFPVW LRDIPGIVFR TNNDPFKEEM QRFVKKIVDL 120 MREEMLFSWQ GGPIIMLQIE NEYGNIEHSF GPEGREYVKW AARMALGLGA GVPWIMCRQT 180 DAPENIIDAC NAYYCDGYKP NSHNKPIFWT EDWDGWYTTW GGSLPHRPVE DLAFAVARFF 240 ERGGSFQNYY MYFGGTNFGR TAGGPFYITS YDYDAPIDEY GLLSEPKWGH LKDLHAAIKL 300 CEPALVAADS PQYIKLGPKQ EAHVYHANAR VDSLNSTWHG SQSRCSAFLA NIDERKTTTV 360 RFLGQSYTLP PWSVSILPDC KNVVFNTAKV AAQTSIKPVE LALPYFSDIS TLQQFTAHAE 420 GFNKRASWLT VKEPIRVWSE KNFTVEGILE HLNVTKDYSD YLWYFTRIYV SDDDLAFWEE 480 NKVSPAVTID SMRDVLRIFI NGQLIGSVIG HWVKVVQPVQ FQKGYNDLVL LSQTVGLQNY 540 GAFLERDGAG FKGQTKLTGF KDGDIDLSNL SWTYQVGLQG EHLKLYTQQN NKEAEWTDLT 600 LDEIPSTFTW YKTYFDAPAG VDPVALDLGS MGKGQAWVNG HHLGRYWTLV APEGGCQEIC 660 DYRGAYSSGK CTTNCGKPTQ TWYHIPRSWL QASNNLLVLF EETGGNPFEI SIKIRSARVI 720 CAQVSETHYP PLHKWVHPDF IDGNISVKDM TPEMQLQCQD GYIISSIEFA SYGTPQGSCQ 780 KFSRSNCHAP NSLSVVAKAC EGRIKCSISI SNAVFGGDPC HGIVKTLAAQ ARCVSSTKVG 840 SSQY* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-5 | 8 | 144 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-17 | 1 | 147 | 154 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 3.0e-24 | 756 | 833 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-154 | 1 | 298 | 313 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 833 | 841 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD91079.1 | 0 | 1 | 840 | 51 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
| DDBJ | BAE72075.1 | 0 | 1 | 844 | 51 | 894 | pear beta-galactosidase3 [Pyrus communis] |
| RefSeq | XP_002263385.1 | 0 | 1 | 843 | 44 | 881 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
| RefSeq | XP_002328900.1 | 0 | 1 | 844 | 51 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518051.1 | 0 | 1 | 844 | 55 | 897 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 4.99983e-42 | 7 | 294 | 29 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.001 | 486 | 704 | 399 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-37 | 3 | 313 | 28 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-37 | 3 | 313 | 28 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 722 | 1 | 716 | 0 |
| HO780602 | 639 | 36 | 667 | 0 |
| FF536656 | 256 | 590 | 845 | 0 |
| HO795552 | 562 | 76 | 630 | 0 |
| HO780602 | 35 | 670 | 704 | 0.0000006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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