y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_001637m |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 94020.6 Isoelectric Point: 7.6069 |
Chromosome | Chromosome/Scaffold: 06512 Start: 494302 End: 499417 |
Description | beta-galactosidase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 335 | 0 |
VINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGVDVIETYVFWNVHEPTQGNYDFEGRYDLVRFIKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNEPFKRAMQGFTEKIVSLMKSENLFESQGGPIILSQIENEYGSQSKLLGAAGYNYMTWAANMAVQTGTGVPWVMCKEEDAPDPIINTCNGF YCDSFSPNKPYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAVARFVQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 845 Download |
MGTSSVVKLL SLICLAMFQL INCSVSYDRK AIVINGQRRI LFSGSIHYPR STPDMWEDLI 60 QKAKDGGVDV IETYVFWNVH EPTQGNYDFE GRYDLVRFIK TIHKAGLYAH LRIGPYVCAE 120 WNFGGFPVWL KYVPGISFRT DNEPFKRAMQ GFTEKIVSLM KSENLFESQG GPIILSQIEN 180 EYGSQSKLLG AAGYNYMTWA ANMAVQTGTG VPWVMCKEED APDPIINTCN GFYCDSFSPN 240 KPYKPTIWTE AWSGWFTEFG GPIHQRPVQD LAFAVARFVQ KGGSFVNYYM YHGGTNFGRS 300 AGGPFITTSY DYDAPIDEYG LIRQPKYGHL KELHRSIKMC ERALVSTDPI VTELGSSQQA 360 HLYSSESRDC AAFLANYDTQ SAARVLFNNM HYNLPPWSIS ILPDCRNVVF NTAKVGVQTS 420 QMEMLPANAE MLPWESYDED ISSTDDSSTF TAFGLLEQIN VTRDATDYLW YITSVDIGSS 480 ESFLHGGELP TLIVRSAGHA VHIFINGELS GSAFGTRKNR RFTYTGKVNL RAGKNKIALL 540 SVTVGLQNVG GHFETWNTGI VGPVALHGLD QGKWDLSWQK WTYQVGLKGE AMNLVSPNSV 600 SSVGWMEASL VAKRQQPLTW HKAYFNAPDG DEPLALDMEG MGKGQIWING QSLGRYWTAY 660 ATGNCNRCSY AGTFHPPKCQ LGCGQPTQRW YHVPRSWLKP TQNLLVVFEE LGGNPSRISL 720 VKRSMTSVCA EVAEVHPTIK NWHIESYGRA EELPRPKVHL RCSPGQSISS IKFASFGTPL 780 GTCGSYQQGP CHASTSYDIV EKKCIGKQRC TVTISNSNFG QDPCPNVLKR LSVEAVCAPT 840 NWRG* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-6 | 47 | 130 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-22 | 25 | 327 | 354 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-26 | 760 | 837 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-165 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 21 | 838 | 819 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 839 | 1 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 21 | 839 | 24 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 1 | 843 | 1 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 839 | 1 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 844 | 1 | 847 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 29 | 333 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-40 | 25 | 349 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-40 | 25 | 349 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |