| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001652m |
| Family | GH35 |
| Protein Properties | Length: 842 Molecular Weight: 93277.5 Isoelectric Point: 8.4976 |
| Chromosome | Chromosome/Scaffold: 12525 Start: 632464 End: 638685 |
| Description | beta galactosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 36 | 338 | 0 |
| TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIETYVFWNGHEPSPGKYYFEGNYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGITFRTDNGPFKFQMQKFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGASGQAYSKWAAKMAVDLGTGVPWVMCKQDDAPDPVINTCNGF YCDYFTPNKPYKPKIWTEAWTGWYTEFGSPVPYRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLLRQPKWGHLKD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 842 Download |
| MKKFAVCNNV FVVILLLSLW VCSVSSSVSY DSKAITINGQ RRILISGSIH YPRSSPEMWP 60 DLIQKAKEGG LDVIETYVFW NGHEPSPGKY YFEGNYDLVK FIKLVKQAGL YVHLRIGPYV 120 CAEWNFGGFP VWLKYIPGIT FRTDNGPFKF QMQKFTTKIV NMMKAERLFE SQGGPIILSQ 180 IENEYGPMEY ELGASGQAYS KWAAKMAVDL GTGVPWVMCK QDDAPDPVIN TCNGFYCDYF 240 TPNKPYKPKI WTEAWTGWYT EFGSPVPYRP AEDLAFSVAR FIQKGGSFIN YYMYHGGTNF 300 GRTAGGPFIA TSYDYDAPID EYGLLRQPKW GHLKDLHRAI KLCEPALVSG NPTVMPLGNY 360 QEAHVFKSKT GACAAFLANY NQRSISKVAF GNMHYNLPPW SISILPDCKN TVYNTARIGA 420 QSARMKMTPV PIHGGLSWQA YSEETDSDSD STFTMVGLKE QINTTRDASD YLWYMTDVNI 480 DPREGFLKSG KYPVLNVRSA GHALHVFING QLSGTAYGSL EFPKLTFSQG VKMRAGINKI 540 SLLSIAVGLP NVGPHFETWN AGILGPVTLN GLNEGRRDLS RQKWSYKIGL KGEALSLHSL 600 SGSSSVEWAQ GSIVSQRQAL MWYKTTFNAP AGNSPVALDM GSMSKGQVWI NGQSVGRYWP 660 AYKASGTCGF CNYAGTFNQN KCLSNCGEAS QRWYHVPRSW LNPTGNLLVV FEEWGGDPNG 720 ISLVRREVDS ICADIYEWQP TLMNYMMQAS GKVNKPLRPK AHLACGPGQK ISSIKFASFG 780 TPEGACGSYH EGSCHAFHSY DAFNRLCVGQ NWCSVTVAPE MFGGDPCPGV MKKLAVEAIC 840 S* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-7 | 50 | 186 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 6.0e-21 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-24 | 30 | 330 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-164 | 34 | 340 | 323 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 30 | 841 | 813 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 1 | 841 | 3 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| GenBank | ABV32545.1 | 0 | 20 | 841 | 20 | 841 | beta-galactosidase protein 2 [Prunus persica] |
| EMBL | CAC44500.1 | 0 | 23 | 841 | 25 | 843 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 21 | 841 | 19 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 8 | 841 | 12 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9.80909e-45 | 37 | 336 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4.99983e-42 | 27 | 410 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.009 | 598 | 661 | 506 | 571 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4.99983e-42 | 27 | 410 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
