| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001733m |
| Family | GH35 |
| Protein Properties | Length: 830 Molecular Weight: 92524.2 Isoelectric Point: 7.826 |
| Chromosome | Chromosome/Scaffold: 10493 Start: 1153648 End: 1158157 |
| Description | beta galactosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 33 | 334 | 0 |
| IINGQRRILISGSIHYPRSTPEMWPSLIQKAREGGLDMIETYVFWNGHEPSQGQYYFEDRYDIVKFVKLVQQAGLYVHLRIGPFVCAEWNFGGFPMWLKY IPGIEFRTDNGPFKAQMQKFTTKIVDMMKAERLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAAMAVGLNTGVPWIMCKQQDAPDPVIDTCNGF YCEGFQPNNNNKPKMWTENWTGWYTEYGGAVPYRPPEDTAFSVARFIANSGSFVNYYMYHGGTNFGRTSGLFMATSYDYDAPIDEYGLPHDPKWGHLRDL HK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 830 Download |
| MSRENGFVLL LLLLSSWIAS ATASVTYDQK AIIINGQRRI LISGSIHYPR STPEMWPSLI 60 QKAREGGLDM IETYVFWNGH EPSQGQYYFE DRYDIVKFVK LVQQAGLYVH LRIGPFVCAE 120 WNFGGFPMWL KYIPGIEFRT DNGPFKAQMQ KFTTKIVDMM KAERLFEPQG GPIILSQIEN 180 EYGPVEWEIG APGKAYTKWA AAMAVGLNTG VPWIMCKQQD APDPVIDTCN GFYCEGFQPN 240 NNNKPKMWTE NWTGWYTEYG GAVPYRPPED TAFSVARFIA NSGSFVNYYM YHGGTNFGRT 300 SGLFMATSYD YDAPIDEYGL PHDPKWGHLR DLHKAIKQCE PALVSVDPTV ISLGKNQEAH 360 VYQAKSACAA FLANYDAQYS VKVVFSNKEY WLPPWSISIL PDCKTVVYNT ARIGAQSTQM 420 WMMPAVTGFS WQSYNDEVSV GYTAGTFIHD GLWEQKFITW DKTDYLWYMT NVNIDPNEGF 480 LKNGKSPFLT VNSAGHVLHV FINGQLAGTV YGSLDNPKVK FSQNVNLKAG TNTISLLSAI 540 VGLPNVGVHY DTWNAGVMGP ITLSGLNQGT LDMSKWKWSY KIGLKGEDLN LGTFAGSSSV 600 SWAKGPQLSK KQPLTWYKTT FDAPPGDDPL ALDMYTMGKG QIWINGRSIG RHWPGYTARG 660 NCRDCDYAGT YDDKKCRSKC GQPSQQWYHV PRSWLSPKGN LLVVFEEIGG DPSGISLLKR 720 IVGSVCADIY DDQPAVLNSQ GLVPVKPKAH LWCPPGQTIS QIKFASYGWP QGRCGFFQQG 780 KCHAQKSWDP FQRNCLGKQS CEVAVDPANF GGDPCPGSPK KLSVEVRCS* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.0004 | 47 | 183 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-20 | 25 | 318 | 321 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-21 | 751 | 828 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-157 | 31 | 336 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 15 | 829 | 821 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32546.1 | 0 | 20 | 829 | 23 | 836 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 16 | 829 | 18 | 836 | beta-galactosidase [Prunus salicina] |
| RefSeq | XP_002308268.1 | 0 | 15 | 829 | 18 | 838 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 17 | 829 | 22 | 840 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002514109.1 | 0 | 1 | 829 | 1 | 827 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9.99995e-41 | 29 | 332 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 7e-36 | 34 | 321 | 12 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 7e-36 | 34 | 321 | 12 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
