| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_001960m |
| Family | GH3 |
| Protein Properties | Length: 790 Molecular Weight: 86401.6 Isoelectric Point: 6.3501 |
| Chromosome | Chromosome/Scaffold: 09335 Start: 232533 End: 236393 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 71 | 340 | 0 |
| SEIPRLGIPPYEWWSESLHGIATNGPGVSFESGPVSSATGFPQVIVSAAAFNRTLWFLIGSAIAVEARAMYNVGQAGLTFWAPNINVFRDPRWGRGQETP GEDPMVASAYAIEYVKGFQGGDWKIGGGQGSGGGLGERRVLREVDDGLMLSACCKHFTAYDLEKWGNFSRYSFNAVVTEQDLEDTYQPPFRSCIQQGKAS CLMCSYNQVNGVPACAREDFLQKARTEWGFHGYIVSDCDAVATIFEYQNYTKSPEDAVAIALKAGMDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 790 Download |
| MPLHCGFFFF LILFLQPSIS KSLIPQFPCQ PPYHSSYPFC NKSLSIPARA QSLISLLTLQ 60 EKILQLANNA SEIPRLGIPP YEWWSESLHG IATNGPGVSF ESGPVSSATG FPQVIVSAAA 120 FNRTLWFLIG SAIAVEARAM YNVGQAGLTF WAPNINVFRD PRWGRGQETP GEDPMVASAY 180 AIEYVKGFQG GDWKIGGGQG SGGGLGERRV LREVDDGLML SACCKHFTAY DLEKWGNFSR 240 YSFNAVVTEQ DLEDTYQPPF RSCIQQGKAS CLMCSYNQVN GVPACAREDF LQKARTEWGF 300 HGYIVSDCDA VATIFEYQNY TKSPEDAVAI ALKAGMDINC GSYVIRHAQS AVDQGKLQEE 360 DIDRALLNLF SVQLRLGLFD GNPKNGQFGN LGPEAVCTKE HKTLALEAAR QGIVLLKNDK 420 QFLPLNKTAV SSLAIVGPMA NNATNLGGDY TGYPCDPQSL FAGLKSYITE TSYAVGCPDV 480 SCDSDAQFHE AINIAKSADY VVVVAGLDLS QETEEHDRVS LLLPGKQMAL VSSVAAVSKK 540 PVILVLIGGG PLDVSFAKLD PRVASILWIG YPGEAGAKAL AEVIFGEYNP GGRLPMTWYP 600 ESFTKIPMTD MNMRADPFRG YPGRTYRFYT GPRVYGFGEG LSYTSFTYKF LSAPSKLSLS 660 GSLTANSRKR ILHQKGKTLG YIQIDEMNSC NSLRFHVQIS VMNVGDMDGS HVVMLFSKVP 720 KVFKGTPEKQ LVGFDRVHTI SYTSTETSIL VDPCMHLSIA NEQGKRVMPL GDHVLMLGDL 780 EYFFTIEAY* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-53 | 67 | 451 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-54 | 413 | 644 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 6.0e-58 | 58 | 365 | 338 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-69 | 109 | 778 | 722 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 4 | 788 | 791 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC41913.1 | 0 | 59 | 787 | 2 | 731 | putative beta-xylosidase [Arabidopsis thaliana] |
| EMBL | CBI25718.1 | 0 | 8 | 787 | 7 | 767 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_196618.1 | 0 | 12 | 787 | 10 | 791 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264031.1 | 0 | 8 | 787 | 7 | 788 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299457.1 | 0 | 17 | 789 | 19 | 780 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 151 | 778 | 128 | 722 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3u48_A | 0 | 151 | 778 | 128 | 722 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3u4a_B | 0 | 151 | 778 | 128 | 722 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3u4a_A | 0 | 151 | 778 | 128 | 722 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 2x41_A | 3e-37 | 49 | 778 | 3 | 699 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
