| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002077m |
| Family | GH3 |
| Protein Properties | Length: 775 Molecular Weight: 84395.5 Isoelectric Point: 8.456 |
| Chromosome | Chromosome/Scaffold: 01551 Start: 3101931 End: 3106473 |
| Description | beta-xylosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 79 | 326 | 0 |
| AAVPRLGIQGYEWWSEALHGVSNVGPGVKFGGAFPGATSFPQVITTAASFNESLWEQIGRVVSDEARAMYNGGLAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLAGKYAASYVRGLQSMTGIKLKVAACCKHYTAYDLDNWNGVDRYHFNAVVSKQDLEDTYDVPFKACVVEGKAASVMCSYNQVNGKPTCADPDLLKN TIRGEWRLNGYIVSDCDSVGVLYDNQHYTSTPEEAAAATIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 775 Download |
| MAYKYHTHPF LICSFFFFLV CIPFYAVESR APFACDPSNG LTRTLKFCRV NVPIHVRVRD 60 LIGRLTLQEK IRLLVNNAAA VPRLGIQGYE WWSEALHGVS NVGPGVKFGG AFPGATSFPQ 120 VITTAASFNE SLWEQIGRVV SDEARAMYNG GLAGLTYWSP NVNIFRDPRW GRGQETPGED 180 PVLAGKYAAS YVRGLQSMTG IKLKVAACCK HYTAYDLDNW NGVDRYHFNA VVSKQDLEDT 240 YDVPFKACVV EGKAASVMCS YNQVNGKPTC ADPDLLKNTI RGEWRLNGYI VSDCDSVGVL 300 YDNQHYTSTP EEAAAATIKA GLDLDCGPFL AIHTQNAINK RLLREEDVNL ALANTITVQM 360 RLGMFDGEPS AHPYGNLGPR DVCTPPHQQL ALEAARQGIV LLQNRGGTLP LSPTRHRNIA 420 VIGPNSDVTV TMIGNYAGIA CSYTTPLQGI GRYARTIHQP GCSDVACNGN QNFGLAEVAA 480 RHADATVLVM GLDQSIEAEF RDRVGLLLPG YQQELVSRVA RASRGPIVLV LMSGGPIDVS 540 FAKNDPRIGA ILWVGYPGQA GGTAIADVLF GTTNPGGKLP MTWYPQSYLA QVPMTNMGMR 600 PDPSKGYPGR TYRFYKGPVV FPFGHGLSYT SFSHSLSQAP KQLSLPITSL KALKNTTISS 660 KAIRVSHTNC DSLFLGLDID VKNTGTMDGT HTLMVFSSPP AGKWSSNKQL IGFEKVHLVA 720 GSQKQVRINI HACKHLSVVD QFGIRRIPVG EHDLHIGDLK HSISLQANLE EIKV* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-60 | 76 | 463 | 395 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-62 | 61 | 328 | 272 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-63 | 399 | 630 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-81 | 116 | 730 | 666 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 9 | 767 | 783 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS17751.2 | 0 | 14 | 773 | 10 | 771 | beta xylosidase [Fragaria x ananassa] |
| DDBJ | BAG28345.1 | 0 | 21 | 748 | 16 | 743 | arabinofuranosidase [Citrus unshiu] |
| RefSeq | XP_002311398.1 | 0 | 25 | 769 | 12 | 755 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316021.1 | 0 | 25 | 773 | 20 | 767 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519194.1 | 0 | 25 | 773 | 34 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 116 | 730 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3u48_A | 0 | 116 | 730 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3u4a_B | 0 | 116 | 730 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3u4a_A | 0 | 116 | 730 | 91 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 2x41_A | 4.99983e-42 | 57 | 769 | 3 | 711 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
