| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002200m |
| Family | CBM22 |
| Protein Properties | Length: 761 Molecular Weight: 85380.1 Isoelectric Point: 5.644 |
| Chromosome | Chromosome/Scaffold: 04260 Start: 350395 End: 354728 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 47 | 182 | 4e-30 |
| IILNPRFEDGLNNWSGKGCKIEVHESMGDGRIIPQSGKFFASATERTEKWNGIEQEITGRVQQHVAYEVVALVRIYSDYITSAGVEVTLWVQEQDLREEY IAIANSQATDKDWVQLQGEFLLNSSPSRAVIYLEGP | |||
| CBM22 | 217 | 358 | 7.39998e-41 |
| NIIENSDLDDATAGWFPLGNCALSVQTGSPHVLPPMASDSLGPYKPLSGRYIMVTNRSDSWMGPAQMITEKLQLYLTYQVSAWVRIGAGATEPQILNVAL SVDGQWVNGGEVESNDDKWHEIGGSFRIEKQASNVMVYVQGP | |||
| GH10 | 411 | 692 | 0 |
| LVKVAQTQNSFPLGSCITRTSMDNEEFLKFFIKNFNWAVFENEMKWSWTEPQEGKFDYREADELVDWCKNHNIEIRGHCIFWEMEYAVQSWVRSLNESGL RTAVQNHLTDLLTRYKGMFKHYDVNNEMLHGSFYKDRLGKDIRANIFKTANQLDPSANLFVNDYHIEDGIDIRSTPEKYIQQILDLQEQGAPVGGIGIQG HIDVPVGSIVSSALNKLGTLGLPIWFTELDVSSANEYIRADDLEVMLREAYAHPAVEGVILWGFWELYMSRKYAHLVNADGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 761 Download |
| MEQLLSSRIV ILLLLVLLLG LSAESVVVPN QFYQIASKGH VAAADSIILN PRFEDGLNNW 60 SGKGCKIEVH ESMGDGRIIP QSGKFFASAT ERTEKWNGIE QEITGRVQQH VAYEVVALVR 120 IYSDYITSAG VEVTLWVQEQ DLREEYIAIA NSQATDKDWV QLQGEFLLNS SPSRAVIYLE 180 GPPPGTDILI NSLFVMHAEK NPTSSRPVSK NVPFGVNIIE NSDLDDATAG WFPLGNCALS 240 VQTGSPHVLP PMASDSLGPY KPLSGRYIMV TNRSDSWMGP AQMITEKLQL YLTYQVSAWV 300 RIGAGATEPQ ILNVALSVDG QWVNGGEVES NDDKWHEIGG SFRIEKQASN VMVYVQGPAS 360 GVDLMVAGLH IFPVNRKARF KYLKQQTDKI RKRDIILKFS GSENSNILGN LVKVAQTQNS 420 FPLGSCITRT SMDNEEFLKF FIKNFNWAVF ENEMKWSWTE PQEGKFDYRE ADELVDWCKN 480 HNIEIRGHCI FWEMEYAVQS WVRSLNESGL RTAVQNHLTD LLTRYKGMFK HYDVNNEMLH 540 GSFYKDRLGK DIRANIFKTA NQLDPSANLF VNDYHIEDGI DIRSTPEKYI QQILDLQEQG 600 APVGGIGIQG HIDVPVGSIV SSALNKLGTL GLPIWFTELD VSSANEYIRA DDLEVMLREA 660 YAHPAVEGVI LWGFWELYMS RKYAHLVNAD GKINLAGKRF LALKREWLSH ARGTINQQGE 720 FRFRGFQGTY NIEVISSSKI VNRTFIVDKG DLPLILSIAL * 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 3.0e-13 | 216 | 361 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 5.0e-17 | 47 | 186 | 142 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 5.0e-41 | 389 | 674 | 308 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| smart00633 | Glyco_10 | 9.0e-80 | 454 | 700 | 268 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-80 | 419 | 704 | 306 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002283550.1 | 9e-34 | 38 | 369 | 86 | 414 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283550.1 | 0 | 42 | 760 | 263 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283550.1 | 0.00000001 | 217 | 372 | 94 | 246 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301133.1 | 0 | 21 | 760 | 307 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510024.1 | 0 | 36 | 760 | 102 | 827 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 1e-32 | 444 | 673 | 39 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 1i1w_A | 1e-32 | 444 | 673 | 39 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-32 | 444 | 673 | 39 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1tux_A | 1e-31 | 444 | 673 | 39 | 268 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1k6a_A | 2e-31 | 444 | 673 | 39 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
