| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002265m |
| Family | GT4 |
| Protein Properties | Length: 753 Molecular Weight: 85933.5 Isoelectric Point: 6.1126 |
| Chromosome | Chromosome/Scaffold: 03975 Start: 229806 End: 235130 |
| Description | sucrose synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 565 | 730 | 0 |
| LKDRNKPIIFTMARLDRVKNLSGLVEWYGKNAKLRELANLVVVGGDRRKESKDLEEQAEMKKMHSLIEKYNLNGQFRWISSQMNRVRNGELYRCICDTKG VFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDQAAELLVEFFEKCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 753 Download |
| MAERVITRVH SIRERLDETL SAHRNEIVAL LSRIEGKGKG ILQHHQIIAE FEAIPEENRK 60 KLLDGAFGEV LRSAQEAIVL PPWVALAVRP RPGVWEYIRV NVHALVVEEL RVAEYLHFKE 120 ELVDGSVNGN FVLELDFEPF NASFPRPTLS KYIGNGVEFL NRHLSAKLFH DKESLHPLLE 180 FLKVHCHKGK NMMLNDRIHN LNSLQYVLRK AEEYLTALSP DTPYSQFEHR FQEIGLERGW 240 GDTAERVLEM IRLLLDLLEA PDPCTLETFL GRIPMVFNVV IMSPHGYFAQ DNVLGYPDTG 300 GQVVYILDQV RALETEMLQR IKQQGLDITP RILIITRLLP DAVGTTCGQR LEKVFGTEHS 360 DILRVPFRNE KGIVRKWISR FEVWPYLETY TEDVATEIGK ELQGKPDLII GNYSDGNIVA 420 SLLAHKLGVT ECTIAHALEK TKYPDSDIYW KKFDEKYHFS CQFTADLIAM NHTDFIITST 480 FQEIAGSKDT VGQYESHTAF TLPGLYRVVH GIDVFDPKFN IVSPGADESI YFAYTEEKRR 540 LTSFHPEIEE LLYSPVENEE HLCVLKDRNK PIIFTMARLD RVKNLSGLVE WYGKNAKLRE 600 LANLVVVGGD RRKESKDLEE QAEMKKMHSL IEKYNLNGQF RWISSQMNRV RNGELYRCIC 660 DTKGVFVQPA LYEAFGLTVV EAMTCGLPTF ATCNGGPAEI IVHGKSGFNI DPYHGDQAAE 720 LLVEFFEKCK ADPPHWDKIS QGAMQRIQEK YA* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 2.0e-57 | 279 | 752 | 482 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 1.0e-113 | 278 | 751 | 475 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 751 | 754 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 24 | 751 | 732 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 7 | 554 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR03498.1 | 0 | 1 | 752 | 1 | 752 | sucrose synthase [Populus tremuloides] |
| GenBank | ABD96570.1 | 0 | 1 | 752 | 1 | 752 | sucrose synthase [Manihot esculenta] |
| GenBank | ACV72640.1 | 0 | 1 | 752 | 1 | 752 | sucrose synthase 1 [Gossypium hirsutum] |
| RefSeq | XP_002324136.1 | 0 | 1 | 752 | 1 | 752 | hypothetical protein POPTRDRAFT_835735 [Populus trichocarpa] |
| RefSeq | XP_002326309.1 | 0 | 5 | 752 | 3 | 750 | hypothetical protein POPTRDRAFT_826368 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 2 | 752 | 4 | 754 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3s29_G | 0 | 2 | 752 | 4 | 754 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3s29_F | 0 | 2 | 752 | 4 | 754 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3s29_E | 0 | 2 | 752 | 4 | 754 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3s29_D | 0 | 2 | 752 | 4 | 754 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 752 | 1 | 752 | 0 |
| BU103683 | 752 | 2 | 752 | 0 |
| CX109054 | 598 | 101 | 698 | 0 |
| FG227316 | 453 | 276 | 728 | 0 |
| GW837855 | 411 | 342 | 752 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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