| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002349m |
| Family | AA3 |
| Protein Properties | Length: 743 Molecular Weight: 81392.4 Isoelectric Point: 7.0692 |
| Chromosome | Chromosome/Scaffold: 07005 Start: 97080 End: 100227 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 227 | 738 | 4.2039e-45 |
| EDPEHNTCKIKCDVVIIGSGCGGGVAAAVLANSGQKVLVLEKGNYYVPADYSSLEWPSMAELYESSGFLSTLNGRIMILAGSTVGGGSAINWSACIRTPD SVLRDWRVDHKIPLFGSSDYQNAMDAVCNRIGVTDNCSKEGFQNQVLRKGCENIGLQVGSVPRNSSEDHYCGSCNFGCRTGEKKGTDSTWLVDAVSRGAV ILSGCEAEKFMLEDSNNGSRKNCLGVIARASNTNITYILQVEARVTISACGSLLTPPLMISSGLVNPNIGRNLHLHPVIMAWGYFPEHESDFKGKMYEGG IITSIHKVVSEGSKVCAIIETPALGPASFAALSPWISGQDLKDKMVKYPRTAHLFALIRDRGSGEVKVKGRITHRLDQLDKDNLRIGLRQALRILVGAGA VEVGTYRSDGQKIACKGIKEKDLEEFLDTITVPGGPKSKEQNWTTLFSAHQMSSCRMGATEEEGAVDENGESWEAKNLYVCDGSVLPTAIGVNPMITIQS TAYCISKKIAES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 743 Download |
| MEQRESCHPL LKGGKRMSSY SHGLSSGQIQ TLAAMCEAFV PPLPADDLSK EIPVDKLQAV 60 RSFYRASGSE PPIPDEVAEL LVTTGLKEVV LIVKLILKVL SFRLGTLLLC GFMCFDWNWP 120 FMHKFSEISL EKREEILKKW SRETFFMPLR IVFIAVKIFS LYVFFSRTDE NLQNPAWEAI 180 GYNKDTREKL RKSKEERPLQ KGIIELANED DSTLTPSLIQ KGLQVSEDPE HNTCKIKCDV 240 VIIGSGCGGG VAAAVLANSG QKVLVLEKGN YYVPADYSSL EWPSMAELYE SSGFLSTLNG 300 RIMILAGSTV GGGSAINWSA CIRTPDSVLR DWRVDHKIPL FGSSDYQNAM DAVCNRIGVT 360 DNCSKEGFQN QVLRKGCENI GLQVGSVPRN SSEDHYCGSC NFGCRTGEKK GTDSTWLVDA 420 VSRGAVILSG CEAEKFMLED SNNGSRKNCL GVIARASNTN ITYILQVEAR VTISACGSLL 480 TPPLMISSGL VNPNIGRNLH LHPVIMAWGY FPEHESDFKG KMYEGGIITS IHKVVSEGSK 540 VCAIIETPAL GPASFAALSP WISGQDLKDK MVKYPRTAHL FALIRDRGSG EVKVKGRITH 600 RLDQLDKDNL RIGLRQALRI LVGAGAVEVG TYRSDGQKIA CKGIKEKDLE EFLDTITVPG 660 GPKSKEQNWT TLFSAHQMSS CRMGATEEEG AVDENGESWE AKNLYVCDGS VLPTAIGVNP 720 MITIQSTAYC ISKKIAESLI GR* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 0.0007 | 660 | 740 | 83 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| TIGR03970 | Rv0697 | 0.0001 | 553 | 739 | 198 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 9.0e-21 | 597 | 731 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-24 | 262 | 742 | 542 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-87 | 285 | 504 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 20 | 739 | 1 | 716 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 4 | 742 | 2 | 738 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 1 | 739 | 1 | 746 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 4 | 742 | 2 | 738 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 1 | 739 | 1 | 741 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00000006 | 237 | 714 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3cnj_A | 0.0002 | 673 | 728 | 437 | 487 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.0002 | 673 | 728 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.0002 | 673 | 728 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4v_A | 0.0002 | 673 | 728 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 745 | 2 | 739 | 0 |
| HO779224 | 463 | 208 | 668 | 0 |
| EX275136 | 291 | 444 | 734 | 0 |
| FN753067 | 300 | 261 | 559 | 0 |
| EL893058 | 291 | 413 | 702 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
