| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002537m |
| Family | GT4 |
| Protein Properties | Length: 721 Molecular Weight: 80892.4 Isoelectric Point: 10.8281 |
| Chromosome | Chromosome/Scaffold: 05185 Start: 1353 End: 5885 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT4 | 550 | 689 | 1.8e-26 |
| VLSKLEEAQEQHLKLLIGSVGSKSNKVLYVKEMLRYMSERSNLSKSVIWTPATTRVAALYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTK EIVEQNVTGLVHPVGRPGTHILAQNLKYLLKNPSVRQQMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 721 Download |
| MEDVINRGDL HINVVRQSSL RGGNMKSTLS GRSTPKNSPT LRKLHSSRTP RREGRSIGGG 60 VQWFRSNRLV YWLLLITLWA YLGFYVQSRW AHGDNKEEFL GFGGKTRNGV SETEQNARRD 120 LLANDSSMAV NNRTNKIQIE DGKRIGVVLA KKGNKISSDQ NKVSTSRKRS KRTGRRSRSK 180 ARGKQKAIVE VGSNDIGVQE PDIPQKNTSY GFLVGPFGST EDRVLEWSPE KRTGTCDRKG 240 DFARLVWSRK FVLIFHELSM TGAPLSMMEL ATEFLSCGAT VSAVVLSKKG GLMPELARRK 300 IKVLEDRADL SFKTAMKADL VIAGSAVCAS WIDQYIAHFP AGGSQIAWWI MENRREYFDR 360 SKIVLNRVKM LVFLSEFQTK QWLSWCDEEN IKLRSPPAIV QLSINDELAF VAGIPCSLNT 420 PSSSPEKMLE KRRLLRDSVR KEMGLTDNDV LVMSLSSINP GKGQLLLLES VQLLIEQEPL 480 RKTRTSVRMT GERSTLAAKH HLRALLQESR DADESSTSRS SKSSIGLNEP KKKGSQLSRL 540 FNKRRKRSKV LSKLEEAQEQ HLKLLIGSVG SKSNKVLYVK EMLRYMSERS NLSKSVIWTP 600 ATTRVAALYS AADVYVINSQ GLGETFGRVT IEAMAFGLPV LGTDAGGTKE IVEQNVTGLV 660 HPVGRPGTHI LAQNLKYLLK NPSVRQQMGM KGRKKVERMY LKQHLYKKFV EVLYKCMRVK 720 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03799 | GT1_amsK_like | 3.0e-20 | 580 | 698 | 125 | + This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. | ||
| TIGR00072 | hydrog_prot | 1.0e-20 | 580 | 711 | 133 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
| cd03798 | GT1_wlbH_like | 1.0e-20 | 580 | 716 | 139 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 2.0e-23 | 588 | 698 | 111 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 4.0e-29 | 580 | 714 | 137 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71826.1 | 0 | 1 | 720 | 1 | 734 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36173.1 | 0 | 1 | 720 | 1 | 683 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284822.1 | 0 | 15 | 720 | 4 | 691 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298139.1 | 0 | 1 | 720 | 1 | 681 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528176.1 | 0 | 1 | 720 | 1 | 686 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.000000004 | 522 | 718 | 202 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.000000004 | 522 | 718 | 202 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.000000004 | 522 | 718 | 202 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.000000004 | 522 | 718 | 202 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.000000004 | 522 | 718 | 202 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
