| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002723m |
| Family | GH2 |
| Protein Properties | Length: 703 Molecular Weight: 78937 Isoelectric Point: 6.4563 |
| Chromosome | Chromosome/Scaffold: 05875 Start: 1946252 End: 1952613 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 2 | 568 | 0 |
| IRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDVFGMYMIDEANIETHGFHLCGHLKHPTSEQSWATAMIDRVIGMVERD KNHACIISWSLGNESSYGPNHSAAAGWVRGRDTSRLLHYEGGGSRTTSTDIICPMYMRVQDIVKIAKDPTEPRPLILCEYSHSMGNSNGNIDEYWEAIDS TLGLQGGFIWDWVDQGLLKESSDGSKHWAYGGDFGDTPNDLNFCLNGLTWPDRTPHPALHEVKYLYQPIKVSLQQSTIKITNTHFFETTQGLEFSWAVHG DGHELGSGILSLPAIKPQSNYDIKWESAPWHSLWASSSAGEFFLTITAKLLHSTRWVEAGHVISSTQVQLPPRKEIIPYVIKAKAADATLATEIIDDTFR VSQQKFWEITLNIQTGTIESWKVEGVTVMNKGIFPCFWRAPTDNDKGGDENSYYCRWKAAHIDNLKFETRSCTIQNTSDHLVKIEVVYAGIEHGSSAHNA LFKVDMTYTIFSSGDLIIECNVIPNSDLPPLPRVGVEFNLEKSMAKIRWFGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 703 Download |
| MIRGVNRHEH HPRVGKTNIE SCMVKDLVLM KQNNINAVRN SHYPQHPRWY ELCDVFGMYM 60 IDEANIETHG FHLCGHLKHP TSEQSWATAM IDRVIGMVER DKNHACIISW SLGNESSYGP 120 NHSAAAGWVR GRDTSRLLHY EGGGSRTTST DIICPMYMRV QDIVKIAKDP TEPRPLILCE 180 YSHSMGNSNG NIDEYWEAID STLGLQGGFI WDWVDQGLLK ESSDGSKHWA YGGDFGDTPN 240 DLNFCLNGLT WPDRTPHPAL HEVKYLYQPI KVSLQQSTIK ITNTHFFETT QGLEFSWAVH 300 GDGHELGSGI LSLPAIKPQS NYDIKWESAP WHSLWASSSA GEFFLTITAK LLHSTRWVEA 360 GHVISSTQVQ LPPRKEIIPY VIKAKAADAT LATEIIDDTF RVSQQKFWEI TLNIQTGTIE 420 SWKVEGVTVM NKGIFPCFWR APTDNDKGGD ENSYYCRWKA AHIDNLKFET RSCTIQNTSD 480 HLVKIEVVYA GIEHGSSAHN ALFKVDMTYT IFSSGDLIIE CNVIPNSDLP PLPRVGVEFN 540 LEKSMAKIRW FGRGPFECYP DRKAAAHVGI YEKNVGDMHV PYIVPGECSG RADVRWVSFQ 600 DKDGIGIFAS TYGSSPPMQM SASYYSTAEL HQARHNKDLV QGNNIEVHLD HKHMGVGGDD 660 SWTPSVHDKY LLPAVPYSFS VRFCPITAAT SGLQIYESQL QN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3250 | LacZ | 4.0e-88 | 1 | 566 | 569 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| smart01038 | Bgal_small_N | 5.0e-99 | 408 | 683 | 277 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 3.0e-106 | 1 | 271 | 281 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 5.0e-170 | 1 | 689 | 693 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 1 | 685 | 707 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 702 | 408 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 702 | 408 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 702 | 407 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 702 | 407 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 702 | 407 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t2q_D | 0 | 2 | 684 | 380 | 1050 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3t2q_C | 0 | 2 | 684 | 380 | 1050 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3t2q_B | 0 | 2 | 684 | 380 | 1050 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3t2q_A | 0 | 2 | 684 | 380 | 1050 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 3t2p_D | 0 | 2 | 684 | 380 | 1050 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EL444301 | 298 | 32 | 329 | 0 |
| ES794486 | 347 | 45 | 391 | 0 |
| DY305670 | 385 | 113 | 495 | 0 |
| EY723441 | 287 | 24 | 310 | 0 |
| ES794486 | 93 | 345 | 433 | 0.0003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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