| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003090m |
| Family | GH51 |
| Protein Properties | Length: 669 Molecular Weight: 73162.3 Isoelectric Point: 5.0201 |
| Chromosome | Chromosome/Scaffold: 05421 Start: 99683 End: 111266 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 210 | 648 | 0 |
| QLTSSQKGVIWFDQVSAMPLDTFKGHGFRTELVEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKETIGPWEERPGHFGDVWMYWTDDGLGHFEFLQLAED LGASPIWVFNNGISHQDQVDTSTISPFVQEALDGIEFARGDSDSTWGAIRAAMGHPEPFDLKYVAVGNEDCGKKNYRGNYLKFYEAIKRAYPDIKIISNC DGSSRSLDHPADYYDFHVYTSANNLFSMAHKFDQTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGLEKNSDIVEMASYAPLFVHVNDRRWNPDA IVFNSSQQYGTPSYWVQRFFTESSGATLLNSVLQTDASASLIASAIKWQDTVNSKTYLKIKIVNFGSSTVNLNISVDGLGLNSIQESGSTKTELTSANLM DENSFTNPKKVAPLQTLLDKASKDMDVVLSPNSFTSFDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 669 Download |
| MGSLKLAFTL LLLSFICRCS AVGLDTTLTA RLSVNASVGR VIPETLFGIF FEEINHAGAG 60 GIWGELVNNR GFEAGGPNTP SNIAPWSIIG DGSSLIVSTD RSSCFERNKV ALRMDVFCDS 120 KGNNICPDGG VGIYNPGFWG MNIQKGKTYK VVLYVRSLGS INISVSLTDS NGLQTLATAK 180 IIASASDVLN WTKAEVLLEA KGTNQNSRLQ LTSSQKGVIW FDQVSAMPLD TFKGHGFRTE 240 LVEMLADIKP RFIRFPGGCF VEGEWLRNAF RWKETIGPWE ERPGHFGDVW MYWTDDGLGH 300 FEFLQLAEDL GASPIWVFNN GISHQDQVDT STISPFVQEA LDGIEFARGD SDSTWGAIRA 360 AMGHPEPFDL KYVAVGNEDC GKKNYRGNYL KFYEAIKRAY PDIKIISNCD GSSRSLDHPA 420 DYYDFHVYTS ANNLFSMAHK FDQTSRNGPK AFVSEYAVTG KDAGTGSLLA ALAEAAFLIG 480 LEKNSDIVEM ASYAPLFVHV NDRRWNPDAI VFNSSQQYGT PSYWVQRFFT ESSGATLLNS 540 VLQTDASASL IASAIKWQDT VNSKTYLKIK IVNFGSSTVN LNISVDGLGL NSIQESGSTK 600 TELTSANLMD ENSFTNPKKV APLQTLLDKA SKDMDVVLSP NSFTSFDLLT ELSSISTTDT 660 DSFSRSSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.003 | 64 | 213 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3534 | AbfA | 1.0e-31 | 236 | 433 | 220 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-32 | 482 | 642 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 3.0e-39 | 482 | 642 | 166 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 16 | 668 | 20 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABV32544.1 | 0 | 15 | 668 | 19 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| RefSeq | XP_002307940.1 | 0 | 1 | 668 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322584.1 | 0 | 1 | 668 | 5 | 667 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 19 | 668 | 29 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 3e-20 | 236 | 620 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 3e-20 | 236 | 620 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 3e-20 | 236 | 620 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 3e-20 | 236 | 620 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 3e-20 | 236 | 620 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
