| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003430m |
| Family | GH35 |
| Protein Properties | Length: 641 Molecular Weight: 71373.8 Isoelectric Point: 8.2652 |
| Chromosome | Chromosome/Scaffold: 05875 Start: 431517 End: 438691 |
| Description | beta galactosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 40 | 342 | 0 |
| TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVKQAGLYLHLRIGPYVCAEWNFGGFPVWLKY IPGINFRTDNGPFKAQMQRFTTKIVNMMKAEGLFESQGGPIILSQIENEYGPMEYELGAPGQAYTKWAASMAVGLGTGVPWVMCKQDDAPDPVINTCNGF YCDYFSPNKPYKPKMWTEAWTGWFTEFGGAVPYRPAEDLAFSVARFIQKGGSYINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 641 Download |
| MVMAVKKLTM CNNVLVVFLL LGLWVCSVSA SVSYDSKAIT INGQRRILIS GSIHYPRSSP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYYFEGNY DLVKFVKLVK QAGLYLHLRI 120 GPYVCAEWNF GGFPVWLKYI PGINFRTDNG PFKAQMQRFT TKIVNMMKAE GLFESQGGPI 180 ILSQIENEYG PMEYELGAPG QAYTKWAASM AVGLGTGVPW VMCKQDDAPD PVINTCNGFY 240 CDYFSPNKPY KPKMWTEAWT GWFTEFGGAV PYRPAEDLAF SVARFIQKGG SYINYYMYHG 300 GTNFGRTAGG PFIATSYDYD APLDEYGLLR QPKWGHLKDL HRAIKLCEPA LVSGDPAVIP 360 LGNYQEAHVF KSKSGACAAF LANYNQRSFS KVAFGNMHYN LPPWSISILP DCKNTVYNTA 420 RVGAQSAQMK MVPVPMHGGF SWQAYSEETD SEGDNTFTMV GLLEQINTTR DVTDYLWYMT 480 DVNLDPSEGF LRSGEYPILN VLSAGHALHV FVNGQLSGTA YGSLEFPKLT FSQGVKMRAG 540 INKISLLSIA VGLPNVGPHF ETWNAGILGP VTLNGLNEGR RDLSWQKWSY KIGLKGEAMS 600 LHSLSGSSSV EWTQGAFVSR RQPLMWYKVS ILNLNVKMLW * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-5 | 54 | 190 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 2.0e-22 | 32 | 334 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-166 | 38 | 344 | 323 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 26 | 630 | 606 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 3 | 631 | 1 | 632 | unknown [Populus trichocarpa x Populus deltoides] |
| GenBank | ABV32545.1 | 0 | 24 | 631 | 20 | 627 | beta-galactosidase protein 2 [Prunus persica] |
| EMBL | CAC44500.1 | 0 | 27 | 631 | 25 | 629 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 25 | 631 | 19 | 625 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 5 | 631 | 1 | 631 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 41 | 340 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 5e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 5e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
