| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003546m |
| Family | CBM57 |
| Protein Properties | Length: 632 Molecular Weight: 69452.9 Isoelectric Point: 8.4022 |
| Chromosome | Chromosome/Scaffold: 04851 Start: 299650 End: 305726 |
| Description | receptor like protein 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 208 | 367 | 3.4e-27 |
| CGNGKSKFDVDYSGDQWGGDRFWSRMTTFGQNSDKAISTANSIKKASNAPNFYPAALYQTALVSTDSQPDLAYMMDVDPNKNYSIWLHFAEIDVSITGVG KRVFDILINGNVVFEGVDVAKMSGDRYTALVLNTTVTVNGRTLTITLHPKEGNHAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 632 Download |
| MSRFLLLLLQ SWLLIFCFAF STCLARKPPW VIRISCGSRV NVRTPPTNTL WYKDFAYTGG 60 IPTNATLTSY VAPSLKTLRY FPLSEGPNNC YNIKKVPRGH YSVRVFFALV AHRDSDPNFD 120 NEPLFDISVE GTQIYSSQPG WSSRDDQVFT EAQVFLTDGT ASICFHSTGH GDPAILSIEI 180 IETDDRAYYF GPEWGRGVIL RTVTRLSCGN GKSKFDVDYS GDQWGGDRFW SRMTTFGQNS 240 DKAISTANSI KKASNAPNFY PAALYQTALV STDSQPDLAY MMDVDPNKNY SIWLHFAEID 300 VSITGVGKRV FDILINGNVV FEGVDVAKMS GDRYTALVLN TTVTVNGRTL TITLHPKEGN 360 HAIINAIEVF EVIAAESKTI LEEVRALQAV KGALGLPLRF GWNGDPCVPQ QHPWSGADCQ 420 YDRTSNRWVI DGLGLDNQGL RGFLPSGISG LHHLQSINLS SNNIRGTIPS SIGMITTLEV 480 LDLSYNFFNG SIPDSIGQLM SLRRLNLNGN SLSGRVPAPL GGRLLHGASF NFTDNSGLCG 540 IPGLRTCGPH LSAGAKIGIA FGVSVAFLFM VICLMCWWKR RQNILRAQQI AARGAPYAKS 600 RTQTTHDIQM SRHHNYGYAR TAAENGPSLL S* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 4.0e-5 | 31 | 178 | 163 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 2.0e-8 | 382 | 493 | 117 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-13 | 205 | 331 | 129 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-61 | 34 | 372 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 19 | 631 | 615 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABH07898.1 | 0 | 32 | 631 | 1 | 599 | leucine-rich repeat family protein [Solanum lycopersicum] |
| EMBL | CBI30598.1 | 0 | 29 | 631 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279791.1 | 0 | 32 | 631 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 32 | 631 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 631 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000001 | 440 | 554 | 644 | 755 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.000000002 | 429 | 520 | 467 | 558 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.0000001 | 419 | 520 | 389 | 486 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.000002 | 440 | 521 | 454 | 535 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
| PDB | 3rgz_A | 0.00002 | 454 | 547 | 396 | 489 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
