y
Basic Information | |
---|---|
Species | Manihot esculenta |
Cazyme ID | cassava4.1_003599m |
Family | GH47 |
Protein Properties | Length: 630 Molecular Weight: 70515.4 Isoelectric Point: 6.6098 |
Chromosome | Chromosome/Scaffold: 06582 Start: 23586 End: 31840 |
Description | alpha-mannosidase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH47 | 142 | 626 | 0 |
AFIHAWSGYRNYAMGYDELMPLSRRGVDGLGGLGATVVDALDTAMIMGANEVVSEAGSWIETHLSDRISKKGQVNLFETTIRILGGLLSAYHLSGGEQGT NSMREGQKPIPYLETARNLADRLLVAFTSSPTAIPFSDVVLHDHSAHSSPDGLSSTSEVSTLQLEFNYLSTVSGDPKYSIEAMKVLEHMKNLPKVEGLVP IYISPDTGEFSGENIRLGSRGDSYYEYLLKVWLQQGTSRDTNFTYLHDMYEEAMKGVRHLLVQKSIPNGLVFVGELPYGPKGAFDPKMDHLVCFLPGTLA LGATKGITKEKAMRDNLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPEIAYFHTKEYSEGGLDGGNKGSKFVDDIIIKHADRHNLLRPESVESFFVLY RITEDPKYREWGWQIFEAFEKYTKVESGGYSSLEDVTVLPPRKRDKMETFYLGETLKYLYLLFGDSSVIPLDKFVFNTEAHPLPI |
Full Sequence |
---|
Protein Sequence Length: 630 Download |
MSKSLPYSMK DVHYDNAKFR QRSFVKVISQ SLITSNLKRD CVGCSTGKFL MLLMIFGLAY 60 LILTHTSSPH SFSDGLAKGT NASEESVMDV SNRFGRFWRK PPRLPPRLSP DEKVTNNKPI 120 HELGRLNSDP IWLERQQKVK EAFIHAWSGY RNYAMGYDEL MPLSRRGVDG LGGLGATVVD 180 ALDTAMIMGA NEVVSEAGSW IETHLSDRIS KKGQVNLFET TIRILGGLLS AYHLSGGEQG 240 TNSMREGQKP IPYLETARNL ADRLLVAFTS SPTAIPFSDV VLHDHSAHSS PDGLSSTSEV 300 STLQLEFNYL STVSGDPKYS IEAMKVLEHM KNLPKVEGLV PIYISPDTGE FSGENIRLGS 360 RGDSYYEYLL KVWLQQGTSR DTNFTYLHDM YEEAMKGVRH LLVQKSIPNG LVFVGELPYG 420 PKGAFDPKMD HLVCFLPGTL ALGATKGITK EKAMRDNLLK FEDLENLKLA EDLAKTCFEM 480 YSVTSTGLAP EIAYFHTKEY SEGGLDGGNK GSKFVDDIII KHADRHNLLR PESVESFFVL 540 YRITEDPKYR EWGWQIFEAF EKYTKVESGG YSSLEDVTVL PPRKRDKMET FYLGETLKYL 600 YLLFGDSSVI PLDKFVFNTE AHPLPIKGT* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 7.0e-176 | 134 | 626 | 496 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 0 | 142 | 626 | 488 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001054909.1 | 0 | 5 | 626 | 11 | 634 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_564345.1 | 0 | 1 | 627 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002275664.1 | 0 | 1 | 628 | 1 | 634 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
RefSeq | XP_002306001.1 | 0 | 1 | 629 | 1 | 631 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519694.1 | 0 | 1 | 629 | 1 | 622 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x9d_A | 0 | 78 | 626 | 48 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo3_A | 0 | 135 | 626 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1fo2_A | 0 | 135 | 626 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
PDB | 1fmi_A | 0 | 135 | 626 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
PDB | 1dl2_A | 0 | 134 | 626 | 4 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |