| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003704m |
| Family | GH3 |
| Protein Properties | Length: 622 Molecular Weight: 67605.6 Isoelectric Point: 7.1332 |
| Chromosome | Chromosome/Scaffold: 00619 Start: 3093 End: 6955 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 8 | 183 | 0 |
| GLTFWSPNINIFRDPRWGRGQETPGEDPLLSSKYGSGYVRGLQQRDDGDQNRLKVAACCKHYTAYDLDNWKGTDRYHFNAVVTKQDMDDTFQPPFKSCVL DGNVASVMCSYNQVNGKPTCADPDLLSGVIRGQWKLNGYIVSDCDSVDVFYNSQHYTKTPEEAAAKAILAGLDLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MYNVGLAGLT FWSPNINIFR DPRWGRGQET PGEDPLLSSK YGSGYVRGLQ QRDDGDQNRL 60 KVAACCKHYT AYDLDNWKGT DRYHFNAVVT KQDMDDTFQP PFKSCVLDGN VASVMCSYNQ 120 VNGKPTCADP DLLSGVIRGQ WKLNGYIVSD CDSVDVFYNS QHYTKTPEEA AAKAILAGLD 180 LNCGSFLGQH TEAAVKAGLV NESAIDKAVS NNFATLMRLG FFDGDPSKQL YGKLGPKDVC 240 TQENQDLARE AARQGIVLLK NTPGSLPLSP TTIKNLAVIG PNANVTKTMI GNYEGTPCKY 300 TTPLQGLTAS VATTYQAGCS NVACATAQVD DAKKVAASAD AVVLVMGADQ SIEAESRDRV 360 DLLLPGQQQL LITQVANVSK GPVILVIMSG GGMDISFAKT NDKITSILWV GYPGEAGGAA 420 IADVIFGYYN PSGRLPMTWY PQSYVDKVPM TNMNMRPDPS SGYPGRTYRF YTGETVYSFG 480 DGLSYSKFEH KLVQAPKLVP VQLEEDHTCR SSNCTSINAV EQTCQNLAFD VHLKIKNIGK 540 IRGGHTVFLF STPPSVHNSP QKHLVDFEKV SLDAQTQSLV RFKVDVCKHL GVTDEFGNRK 600 VALGEHVLHV GSLRHSFTVR I* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-48 | 12 | 320 | 314 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-52 | 12 | 211 | 203 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-54 | 256 | 486 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-69 | 12 | 586 | 620 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 1 | 621 | 646 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39114.1 | 0 | 1 | 621 | 154 | 774 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264183.1 | 0 | 1 | 621 | 346 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298197.1 | 0 | 1 | 621 | 119 | 741 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303181.1 | 0 | 1 | 621 | 153 | 773 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513707.1 | 0 | 1 | 621 | 156 | 777 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 12 | 584 | 128 | 696 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 3u48_A | 0 | 12 | 584 | 128 | 696 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 3u4a_B | 0 | 12 | 584 | 128 | 696 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 3u4a_A | 0 | 12 | 584 | 128 | 696 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 2x41_A | 6e-31 | 13 | 490 | 117 | 605 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO798199 | 369 | 250 | 616 | 0 |
| EX688471 | 278 | 28 | 305 | 0 |
| EL371570 | 285 | 9 | 293 | 0 |
| DT556104 | 292 | 77 | 368 | 0 |
| HO799547 | 321 | 53 | 373 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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