| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003726m |
| Family | CBM57 |
| Protein Properties | Length: 620 Molecular Weight: 67852.8 Isoelectric Point: 6.4444 |
| Chromosome | Chromosome/Scaffold: 06656 Start: 19747 End: 28260 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 208 | 353 | 4.7e-24 |
| SDTDVFGRSWQSDSVFRSQSTSNKFHSFSTREKITGTGQAPNFFPMKLYQSAVTGNGVLEYEVTVDAKLDYVLWFHFAEIDSIVKKKGQRVFDVLVNDKN VSRVDIYAQVGSFAAYSFQYTVHNLSSSALTVKLRPVTGAPLISGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 620 Download |
| MSFFFLSPFL LLLSPALSFP SDISYYIDCG GPTNSTDHFN TTWLSDRFFT GGLTSVVSEP 60 LHFRFPQEKT LRFFPLSSGK KNCYIVPLPS GRYYIRTFTV YDNYDGKSHS PSFDASVEGT 120 LVFSWRSPWS ENLARDGAYS DLFAFVKDGE ADICFYSIAT DPPVIGSLEI RQIDSLSYDS 180 DKIGNNFILV NYGRLSCGSL QGGPGFSSDT DVFGRSWQSD SVFRSQSTSN KFHSFSTREK 240 ITGTGQAPNF FPMKLYQSAV TGNGVLEYEV TVDAKLDYVL WFHFAEIDSI VKKKGQRVFD 300 VLVNDKNVSR VDIYAQVGSF AAYSFQYTVH NLSSSALTVK LRPVTGAPLI SGIENYALIP 360 NDISTAPEQV AAMKALKVSL RVPDRMGWNG DPCAPTNWDT WEGVTCHSNK DGTALVISQI 420 DLGSQGLKGY LSDQISLLSN LVSLNLSSNS LVGTLPSGLG HKSLVRLDLS NNQFSGPIPE 480 SLASSSLQLA LLSNNLLEGP VQEELYSIGV HGGTIDLSGN KGLCGVPSLP QCSLFWENGH 540 LSTGGKIVLA LSCLVFVSLL LLGVCICIKR GRNDYDFAPT HDLTTMAAKR NRYQRQKSLM 600 LLEMESQHAK GLPSPYGPH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 0.001 | 396 | 479 | 92 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 0.0006 | 24 | 156 | 151 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 2.0e-15 | 202 | 353 | 166 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-59 | 27 | 356 | 351 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 7.0e-105 | 27 | 573 | 560 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 16 | 592 | 21 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_001145734.1 | 0 | 15 | 619 | 22 | 634 | hypothetical protein LOC100279241 [Zea mays] |
| RefSeq | NP_564237.2 | 0 | 16 | 614 | 21 | 622 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 17 | 614 | 23 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002524408.1 | 0 | 20 | 590 | 19 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.0000001 | 370 | 495 | 29 | 145 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 4hq1_A | 0.00003 | 431 | 501 | 221 | 295 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3rj0_A | 0.000002 | 420 | 532 | 634 | 745 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3rj0_A | 0.0006 | 420 | 490 | 492 | 563 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
