| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003887m |
| Family | GT5 |
| Protein Properties | Length: 609 Molecular Weight: 66937.4 Isoelectric Point: 8.5817 |
| Chromosome | Chromosome/Scaffold: 00977 Start: 204066 End: 208229 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 84 | 579 | 0 |
| LIFVGAEVGPWSKTGGLGDVLGGLPPAMAARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEKVWGKTGSKIYG PRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIANDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPD KFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIINGMDVQEWNPVTDKYIDIHYDATTVMDAKPLL KEALQAEVGLPVDRNVPLIGFIGRLEEQKGSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRF EPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALRVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 609 Download |
| MATVIAAHLV SRSSHLSIHA LETKANKLSH TGPWTQTITP NGLRSLNTMD KLQMKTQSKA 60 VKKVSATGNG RPAAKIICGH GMNLIFVGAE VGPWSKTGGL GDVLGGLPPA MAARGHRVMT 120 VSPRYDQYKD AWDTSVSVEI KIGDRIETVR FFHSYKRGVD RVFVDHPMFL EKVWGKTGSK 180 IYGPRAGLDY QDNQLRFSLL CLAALEAPRV LNLNSSKNFS GPYGEEVAFI ANDWHTALLP 240 CYLKAIYQPM GIYKHAKVAF CIHNIAYQGR FAFSDFPRLN LPDKFKSSFD FIDGYEKPVK 300 GRKINWMKAG ILESDRVLTV SPYYAQEVIS GVERGVELDN FIRKTGIAGI INGMDVQEWN 360 PVTDKYIDIH YDATTVMDAK PLLKEALQAE VGLPVDRNVP LIGFIGRLEE QKGSDIFVAA 420 ISQLVEHNVQ IVILGTGKKK FEKQIEHLEV LYPDKARGVA KFNVPLAHMI TAGADFMLVP 480 SRFEPCGLIQ LHAMRYGTVP IVASTGGLVD TVKEGYTGFQ MGALRVECDK IDSADVAAIV 540 KTVARALGTY ATAALREMIL NCMAQDLSWK GPARMWEKML LDLEVAGSEP GTEGEEIAPL 600 AKENVPTP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-82 | 87 | 583 | 521 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 3.0e-106 | 82 | 579 | 519 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-130 | 82 | 574 | 512 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 1.0e-169 | 82 | 580 | 507 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-172 | 83 | 574 | 505 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11735.1 | 0 | 1 | 608 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACJ11751.1 | 0 | 1 | 608 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACV72639.1 | 0 | 1 | 608 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| Swiss-Prot | O82627 | 0 | 1 | 608 | 1 | 608 | SSG1_ANTMA RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| Swiss-Prot | Q43784 | 0 | 1 | 608 | 1 | 608 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 82 | 608 | 10 | 536 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 82 | 608 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 82 | 584 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 82 | 585 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 82 | 585 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 610 | 1 | 609 | 0 |
| HO825853 | 516 | 90 | 605 | 0 |
| HO629148 | 569 | 42 | 609 | 0 |
| CN831271 | 381 | 229 | 609 | 0 |
| HO778340 | 398 | 54 | 449 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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