| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003916m |
| Family | GT5 |
| Protein Properties | Length: 608 Molecular Weight: 66821.8 Isoelectric Point: 7.363 |
| Chromosome | Chromosome/Scaffold: 11389 Start: 45616 End: 48924 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 83 | 579 | 0 |
| LVFVGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTVSPRYDQYKDAWDTSVVVEIRVGERNETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTGSKIYG PKAGLDYKDNQLRFSLLCLAALEAPRVLNLNSCKNFSGPYGEDVVFIANDWHTALLPCYLKTFYQPSGIYRTAKVAFCIHNIAYQGRFSFSEFSQLNLPD KFRSSFDFIDGYNKPVKGRKINWMKAGILESDKVLTVSPYYAQEVIDGIERGVELDNIIRKTGITGIINGMDVQEWNPATDKYISINYDATTVMKAKPLL KEALQAEVGLPVGADIPLIGFIGRLEEQKGSDILVAAISQLVEHDVQIVILGTGKSSFETQIEQLEVQYPDKARGLAKFNVTLAHMIIAGSDFMLIPSRF EPCGLIQLHAMRYGTIPIVASTGGLVDTVKEGYTGFHIGAFNVDCETIDPADVAAVVKTVGRAIATYTTSSLREMILNCMAQDFSWKGPARLWEKLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 608 Download |
| MATATAAQFV SMSSHLSNHP SEPKANSGLM GLRSQSTTHH GLRYLNKIDK LQMRTQSKVQ 60 KKVSATENVR PSGKIICGHG MNLVFVGAEV GPWSKTGGLG DVLGGLPPAL AARGHRVMTV 120 SPRYDQYKDA WDTSVVVEIR VGERNETVRF FHCYKRGVDR VFVDHPLFLE KVWGKTGSKI 180 YGPKAGLDYK DNQLRFSLLC LAALEAPRVL NLNSCKNFSG PYGEDVVFIA NDWHTALLPC 240 YLKTFYQPSG IYRTAKVAFC IHNIAYQGRF SFSEFSQLNL PDKFRSSFDF IDGYNKPVKG 300 RKINWMKAGI LESDKVLTVS PYYAQEVIDG IERGVELDNI IRKTGITGII NGMDVQEWNP 360 ATDKYISINY DATTVMKAKP LLKEALQAEV GLPVGADIPL IGFIGRLEEQ KGSDILVAAI 420 SQLVEHDVQI VILGTGKSSF ETQIEQLEVQ YPDKARGLAK FNVTLAHMII AGSDFMLIPS 480 RFEPCGLIQL HAMRYGTIPI VASTGGLVDT VKEGYTGFHI GAFNVDCETI DPADVAAVVK 540 TVGRAIATYT TSSLREMILN CMAQDFSWKG PARLWEKLLL SLEVADSEAG IEGEEITPLA 600 MENVPAP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 7.0e-80 | 177 | 582 | 421 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 5.0e-110 | 81 | 578 | 518 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-132 | 81 | 578 | 509 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-174 | 82 | 579 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 1.0e-174 | 81 | 582 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11735.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACJ11751.1 | 0 | 1 | 607 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACM78591.1 | 0 | 1 | 607 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 1 | 607 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| Swiss-Prot | Q43784 | 0 | 1 | 607 | 1 | 608 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 3vue_A | 0 | 81 | 607 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 81 | 583 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 81 | 584 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 81 | 584 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 609 | 1 | 608 | 0 |
| HO825853 | 518 | 89 | 606 | 0 |
| HO629148 | 582 | 31 | 608 | 0 |
| CN831271 | 382 | 227 | 608 | 0 |
| HO778340 | 398 | 53 | 448 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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