| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_003951m |
| Family | CE8 |
| Protein Properties | Length: 606 Molecular Weight: 66596.7 Isoelectric Point: 8.6188 |
| Chromosome | Chromosome/Scaffold: 11495 Start: 19784 End: 22868 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 291 | 587 | 0 |
| DIIVSQDGNGTCKTIAEAIKKAPEYSTRRTIIYVKAGRYEENNLKVGRKKWNLMFIGDGKGKTVISGRKSIFDNITTFHTAAFAATGAGFISRDITFQNW AGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSIYARKPMPLQKNTITAQNRKDPNQNTGISIHACRL YAMPDLRAANGSFQTFLGRPWKLYSRTVYMLTYMGDHIHPRGWLEWNATFALDTLYYGEYMNYGPGGPVGQRVKWPGYRVINSTIEASRFTVGEFIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 606 Download |
| MKPVNYGRLA PSEPGGSSPP VDQPEHATPH PSRKRGVILL SLLSIVLIIA SAVSATLLIG 60 LRTRASSSQP SPVLARKPTK AISKTCSKTR FRSLCVNSLI DFPGSSAASE EELVHISFNV 120 TLQHFTKALY LSSEISYLQM DTHVRSAYED CLELLDDSVD ALSRSLYTVA PSLDGNTGEQ 180 IQPGGSAEDV VTWLSAALTN HDTCTEGFAD LNGAVKDHMS EKLKDLSELV SNCLAIFSAV 240 DSGDFSGVPI QNRRRLMDAE ISEENADNLP NWLGRKERRL LSLPVSAIQA DIIVSQDGNG 300 TCKTIAEAIK KAPEYSTRRT IIYVKAGRYE ENNLKVGRKK WNLMFIGDGK GKTVISGRKS 360 IFDNITTFHT AAFAATGAGF ISRDITFQNW AGPAKHQAVA LRVGADHAVV YRCNIIGYQD 420 TLYVHSNRQF FRECDIYGTV DFIFGNAAVV FQNCSIYARK PMPLQKNTIT AQNRKDPNQN 480 TGISIHACRL YAMPDLRAAN GSFQTFLGRP WKLYSRTVYM LTYMGDHIHP RGWLEWNATF 540 ALDTLYYGEY MNYGPGGPVG QRVKWPGYRV INSTIEASRF TVGEFIYGSS WLPSTGVAFL 600 AGLAV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 1.0e-167 | 78 | 603 | 529 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 3.0e-168 | 64 | 599 | 545 | + pectinesterase | ||
| PLN02201 | PLN02201 | 4.0e-174 | 117 | 605 | 490 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 0 | 6 | 605 | 601 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 291 | 589 | 299 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42038.1 | 0 | 4 | 605 | 1 | 617 | pectin methylesterase 1 [Pyrus communis] |
| RefSeq | NP_190491.1 | 0 | 62 | 605 | 67 | 598 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002278061.1 | 0 | 62 | 605 | 56 | 597 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 60 | 603 | 14 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 4 | 605 | 1 | 605 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 286 | 603 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 288 | 603 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-19 | 295 | 561 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-19 | 295 | 561 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-19 | 295 | 561 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
