y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004031m |
Family | GT47 |
Protein Properties | Length: 600 Molecular Weight: 68442.7 Isoelectric Point: 6.6034 |
Chromosome | Chromosome/Scaffold: 09880 Start: 794477 End: 796706 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 140 | 479 | 0 |
GKYIYVHDLPPRFNEDMLKECRSLSLWTNMCKFTSNAGLGPPLENVEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTNDSSIAAAIFVPFYAGFDIARY LWGYNISKRDAASLDLVDWLMKRPEWGIMEGRDHFLVAGRITWDFRRLTDEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVF VWQERMRNLERKWLFSFAGAPRPDNPKSIRGQIIDQCKKSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPG SAYTQYTWHLPKNYTTYSVFIPEDDIHKRNVSVEEVLSKI |
Full Sequence |
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Protein Sequence Length: 600 Download |
MWVLVRDCGF VVLMRRRPAA SVPFEQMDKG TGKNQQNRLC LLASLSAFFW ILLLYFHFAV 60 LGGNNVDQSV KLEDQPLNTE SKTSTLVTDA RLTNTPSKTA PFIDASLKNI PSITSSQEEE 120 NFPFMRALRT IENKSDPCGG KYIYVHDLPP RFNEDMLKEC RSLSLWTNMC KFTSNAGLGP 180 PLENVEGVFS NTGWYATNQF AVDVIFSNRM KQYECLTNDS SIAAAIFVPF YAGFDIARYL 240 WGYNISKRDA ASLDLVDWLM KRPEWGIMEG RDHFLVAGRI TWDFRRLTDE ESDWGNKLLF 300 LPAAKNMSML VVESSPWNAN DFGIPYPTYF HPAKDDDVFV WQERMRNLER KWLFSFAGAP 360 RPDNPKSIRG QIIDQCKKSK VGKLLECDFG ESKCHSPSSI MQMFQSSLFC LQPQGDSYTR 420 RSAFDSMLAG CIPVFFHPGS AYTQYTWHLP KNYTTYSVFI PEDDIHKRNV SVEEVLSKIP 480 PEQVKIMREK VISLIPGLIY ADPRSKLETL KDSFDVAVQA VIDKVTRLRR NIIQGRTEYD 540 NFVEENSWKY ELLDAGQREV GAHEWDPFFS KPKDGNSDSG GSSAEAAKKS WKNEQRDQS* 600 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-71 | 137 | 479 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 14 | 599 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 12 | 599 | 5 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 12 | 599 | 5 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002269766.1 | 0 | 13 | 583 | 58 | 652 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 27 | 599 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |