y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004064m |
Family | CBM43 |
Protein Properties | Length: 598 Molecular Weight: 63170.7 Isoelectric Point: 5.1002 |
Chromosome | Chromosome/Scaffold: 10305 Start: 687806 End: 689992 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 418 | 499 | 8.1e-35 |
WCVAKSGVSETALQLALDYACGMGGADCSEIQQGGSCYNPNTLQNHASFAFNSYYQKNPVATSCDFGGTATVINTNPSTGSC |
Full Sequence |
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Protein Sequence Length: 598 Download |
MAEVASNCLF LFFLQLLTLC ASGTQLGFSY NARGSIPASS LSRTLSFLEQ NNVSGSHIRV 60 LIADHRVLRT LSNSGVSVDL YLNETIVENF TNSRSSAVLW LKTHVITFVP HVNMKSIILK 120 GSNDLSKLSS SLKLIHSVLS SFQFNNEVKV SVEFSLSFLE NLNGKQENDL LGVLGFIKKT 180 SSFIIVEGST DNGVELRMGD LFLKSIIQKS TLAISLLPCN DVAVVMKVKS LIDPSLEEVA 240 EFAAKFLKSL ENTQIAGQIT ELYAEVSSAE DFSEKELERE HEQIFPSSRR ELLKTTSHDT 300 INPPGTVPQD NPTPTIVTVP ATNPVTITPT NPASTPIPIP SITPVVVPPM NPSVNPPAPI 360 TNPVTTPAPI TVPGMQPITN PVTTYPTPPV NVPVTAPVTN PISPPATTNA PAIPGQSWCV 420 AKSGVSETAL QLALDYACGM GGADCSEIQQ GGSCYNPNTL QNHASFAFNS YYQKNPVATS 480 CDFGGTATVI NTNPSTGSCV FPLSSSSSST SSLPTPTPST INPVTTPSSP GDGTSGTVTP 540 PSVLNSSSPV PGTTTGFGSD TPPGFNTSTS KSTTMQPSIG CISLITFFIV RIVFLDM* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-25 | 417 | 488 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-42 | 417 | 501 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65737.1 | 0 | 138 | 597 | 50 | 519 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 21 | 597 | 22 | 615 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 1 | 597 | 1 | 615 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002463588.1 | 0 | 67 | 505 | 18 | 519 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
RefSeq | XP_002512573.1 | 0 | 198 | 597 | 1 | 406 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-19 | 417 | 506 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.00008 | 42 | 151 | 16 | 128 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0.003 | 58 | 117 | 30 | 89 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0.003 | 58 | 117 | 30 | 89 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |