| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004067m |
| Family | AA3 |
| Protein Properties | Length: 598 Molecular Weight: 64738.6 Isoelectric Point: 6.7116 |
| Chromosome | Chromosome/Scaffold: 07005 Start: 97080 End: 100227 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 82 | 593 | 1.4013e-45 |
| EDPEHNTCKIKCDVVIIGSGCGGGVAAAVLANSGQKVLVLEKGNYYVPADYSSLEWPSMAELYESSGFLSTLNGRIMILAGSTVGGGSAINWSACIRTPD SVLRDWRVDHKIPLFGSSDYQNAMDAVCNRIGVTDNCSKEGFQNQVLRKGCENIGLQVGSVPRNSSEDHYCGSCNFGCRTGEKKGTDSTWLVDAVSRGAV ILSGCEAEKFMLEDSNNGSRKNCLGVIARASNTNITYILQVEARVTISACGSLLTPPLMISSGLVNPNIGRNLHLHPVIMAWGYFPEHESDFKGKMYEGG IITSIHKVVSEGSKVCAIIETPALGPASFAALSPWISGQDLKDKMVKYPRTAHLFALIRDRGSGEVKVKGRITHRLDQLDKDNLRIGLRQALRILVGAGA VEVGTYRSDGQKIACKGIKEKDLEEFLDTITVPGGPKSKEQNWTTLFSAHQMSSCRMGATEEEGAVDENGESWEAKNLYVCDGSVLPTAIGVNPMITIQS TAYCISKKIAES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 598 Download |
| MVKGNFLHAS QNSVYSCQNL LLTDENLQNP AWEAIGYNKD TREKLRKSKE ERPLQKGIIE 60 LANEDDSTLT PSLIQKGLQV SEDPEHNTCK IKCDVVIIGS GCGGGVAAAV LANSGQKVLV 120 LEKGNYYVPA DYSSLEWPSM AELYESSGFL STLNGRIMIL AGSTVGGGSA INWSACIRTP 180 DSVLRDWRVD HKIPLFGSSD YQNAMDAVCN RIGVTDNCSK EGFQNQVLRK GCENIGLQVG 240 SVPRNSSEDH YCGSCNFGCR TGEKKGTDST WLVDAVSRGA VILSGCEAEK FMLEDSNNGS 300 RKNCLGVIAR ASNTNITYIL QVEARVTISA CGSLLTPPLM ISSGLVNPNI GRNLHLHPVI 360 MAWGYFPEHE SDFKGKMYEG GIITSIHKVV SEGSKVCAII ETPALGPASF AALSPWISGQ 420 DLKDKMVKYP RTAHLFALIR DRGSGEVKVK GRITHRLDQL DKDNLRIGLR QALRILVGAG 480 AVEVGTYRSD GQKIACKGIK EKDLEEFLDT ITVPGGPKSK EQNWTTLFSA HQMSSCRMGA 540 TEEEGAVDEN GESWEAKNLY VCDGSVLPTA IGVNPMITIQ STAYCISKKI AESLIGR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 0.0005 | 515 | 595 | 83 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| TIGR03970 | Rv0697 | 7.0e-5 | 408 | 594 | 198 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 6.0e-21 | 452 | 586 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-25 | 117 | 597 | 542 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 9.0e-88 | 140 | 359 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 23 | 594 | 144 | 716 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 22 | 597 | 161 | 738 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 24 | 594 | 172 | 746 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002314488.1 | 0 | 24 | 594 | 141 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002529832.1 | 0 | 23 | 594 | 169 | 741 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00000004 | 93 | 568 | 18 | 498 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1b8s_A | 0.0001 | 528 | 583 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 2gew_A | 0.0001 | 528 | 583 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4w_A | 0.0001 | 528 | 583 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4v_A | 0.0001 | 528 | 583 | 439 | 489 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 573 | 24 | 594 | 0 |
| HO779224 | 463 | 63 | 523 | 0 |
| EX275136 | 291 | 299 | 589 | 0 |
| FN753067 | 300 | 116 | 414 | 0 |
| EL893058 | 291 | 268 | 557 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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