| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004226m |
| Family | CE8 |
| Protein Properties | Length: 589 Molecular Weight: 64219 Isoelectric Point: 7.7007 |
| Chromosome | Chromosome/Scaffold: 10504 Start: 215875 End: 219027 |
| Description | pectin methylesterase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 281 | 573 | 0 |
| ATVAKDGTGDYKMIGEAVAKIPKKSPYKFIIYVKEGTYIENVILDKHKWNVMIYGDGKDKTIISGSKNFVDGTPTFLTATFAVAGKGFMARDIKFINTAG AAKHQAVAFRSGSDMSVYYQCAFDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTFSA YGSNLTAPTYLGRPWKDFSTTVIMQSEIGSFLKPMGWMSWVSGVDPPGTIFYGEYMNTGPGSAVDQRVKWVGYRPALTEAEAGKFSVGSFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MDSINSFKGY GKVDEVEQQA FRRKARKRLL ILVVSSVVLV AVIVGAVVGT VLHKRNSGSS 60 PSSTVPTELT PAASLKAVCS VTQYPPSCVS SISSLDSANT SDPEVLFKLS LRVAIDELSK 120 LKDYPSKLIE STNNTVVKDA LRVCESVFDD AVDRLNDSIS SMAVGEGETI LSTSKINDMK 180 TWLSTTITDQ ETCLDALQEL NTTKNFNSKL LEEVRTAMEN STEFASNSLA IVAKILGLLS 240 DFNIPIHRKL LGFEGTNSGF PGWVSLGDRR LLQESKPAPN ATVAKDGTGD YKMIGEAVAK 300 IPKKSPYKFI IYVKEGTYIE NVILDKHKWN VMIYGDGKDK TIISGSKNFV DGTPTFLTAT 360 FAVAGKGFMA RDIKFINTAG AAKHQAVAFR SGSDMSVYYQ CAFDAFQDTL YAHSNRQFYR 420 DCDITGTIDF IFGNAAVVFQ NCNIQPRQPL PNQFNTITAQ GKKDPNQNTG ISIQKCTFSA 480 YGSNLTAPTY LGRPWKDFST TVIMQSEIGS FLKPMGWMSW VSGVDPPGTI FYGEYMNTGP 540 GSAVDQRVKW VGYRPALTEA EAGKFSVGSF IQGPEWLPAT TVTFDSNL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 4.0e-159 | 54 | 580 | 550 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 4.0e-160 | 55 | 588 | 545 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 1 | 588 | 589 | + pectinesterase | ||
| PLN02468 | PLN02468 | 0 | 7 | 588 | 589 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 280 | 573 | 299 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65650.1 | 0 | 1 | 582 | 1 | 581 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_175787.1 | 0 | 1 | 582 | 1 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002265217.1 | 0 | 1 | 588 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 1 | 588 | 1 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532945.1 | 0 | 1 | 588 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 273 | 588 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 280 | 588 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-17 | 280 | 578 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-17 | 280 | 578 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 9e-17 | 280 | 578 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
