y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004268m |
Family | GT47 |
Protein Properties | Length: 587 Molecular Weight: 66910.9 Isoelectric Point: 7.4952 |
Chromosome | Chromosome/Scaffold: 06825 Start: 588316 End: 590573 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 127 | 466 | 0 |
GKYIYVHDLPPRFNEDMLKECRSLSLWTNMCKFTSNAGLGPPLENVEGVFSNTGWHATNQFAVDVIFSNRMKQYECLTNDSSIAAAIFVPFYAGFDIARY LWGYNTSTRDAASLDLVDWLMKRPEWGIMGGRDHFLVAGRITWDFRRLTDEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVF SWQERMRNLERKWLFSFAGAPRPDNSKSIRGQIIDQCRKSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPG SAYTQYTWHLPKNYTTYSVFIPEDDIRKRNVSIEEVLSKI |
Full Sequence |
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Protein Sequence Length: 587 Download |
MRRRSAATVP FEQMDKGTGK NQHNRLCLLA SLSAFFWILL LYVHFVVLGS DTVDESVKLD 60 AHPLNPESKT PVFVTDARLT ITRSKTTPMI DASLRNSPSS NSVQKTETFP FVRALRTIDN 120 KSDPCGGKYI YVHDLPPRFN EDMLKECRSL SLWTNMCKFT SNAGLGPPLE NVEGVFSNTG 180 WHATNQFAVD VIFSNRMKQY ECLTNDSSIA AAIFVPFYAG FDIARYLWGY NTSTRDAASL 240 DLVDWLMKRP EWGIMGGRDH FLVAGRITWD FRRLTDEESD WGNKLLFLPA AKNMSMLVVE 300 SSPWNANDFG IPYPTYFHPA KDDDVFSWQE RMRNLERKWL FSFAGAPRPD NSKSIRGQII 360 DQCRKSKVGK LLECDFGESK CHSPSSIMQM FQSSLFCLQP QGDSYTRRSA FDSMLAGCIP 420 VFFHPGSAYT QYTWHLPKNY TTYSVFIPED DIRKRNVSIE EVLSKIPPEQ VKIMREKVIS 480 LIPRLIYADP RSKLETLKDA FDVAVQAVIN KVTKLRRNII EGRTDYDNFV EENSWKYELL 540 DEGQREVGAH EWDPFFSKPK DGNSDSGGSS AEAAKKSWKN EQRDQS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-69 | 124 | 466 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 1 | 586 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 1 | 586 | 7 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 586 | 7 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002269766.1 | 0 | 1 | 570 | 59 | 652 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 14 | 586 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |