y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004325m |
Family | GH14 |
Protein Properties | Length: 583 Molecular Weight: 64837.4 Isoelectric Point: 6.4558 |
Chromosome | Chromosome/Scaffold: 01551 Start: 188658 End: 191427 |
Description | beta-amylase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 118 | 538 | 0 |
YVMMPLDSVTMGNTVNRRKAMNASLQALKSAGVEGIMMDVWWGLVERDAPGVYNWGGYSELLQMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVGEE VDKDKDLAYTDQWGRRNYEYISLGCDTLPVLKGRTPVQCYSDFMRAFRDNFKNLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYML SSLKAAAEAAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWISPYGEFFLNWYSQMLLDHGDRILSSAKAIFENSNVKISVKIAGIHWHYGTRSHAPE LTAGYYNTRYRDGYLPIAQMLGRHGAIFNFTCIEMRDHEQPQDALCAPEKLVQQVALATQKAQIPLAGENALPRYDEYAHEQILQAASLNVDCNSGDREM CAFTYLRMSPHLFQEDNWRRF |
Full Sequence |
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Protein Sequence Length: 583 Download |
MAMNITHQIG ALAGTPISTG PITTTTSEST STVSAAAVWK TPTPNIRCEI KNPDAVEQKS 60 QPTSPCGSPI LNGIRADLSV ACRAFAAEAT TLERETGGEE RMYKEGSVKE KGSGVPVYVM 120 MPLDSVTMGN TVNRRKAMNA SLQALKSAGV EGIMMDVWWG LVERDAPGVY NWGGYSELLQ 180 MAKRHGLKVQ AVMSFHQCGG NVGDSCTIPL PKWVGEEVDK DKDLAYTDQW GRRNYEYISL 240 GCDTLPVLKG RTPVQCYSDF MRAFRDNFKN LLGDTIVEIQ VGMGPAGELR YPSYPEQNGT 300 WKFPGIGAFQ CYDKYMLSSL KAAAEAAGKP EWGSTGPTDA GHYNNWPEDT QFFRKENGGW 360 ISPYGEFFLN WYSQMLLDHG DRILSSAKAI FENSNVKISV KIAGIHWHYG TRSHAPELTA 420 GYYNTRYRDG YLPIAQMLGR HGAIFNFTCI EMRDHEQPQD ALCAPEKLVQ QVALATQKAQ 480 IPLAGENALP RYDEYAHEQI LQAASLNVDC NSGDREMCAF TYLRMSPHLF QEDNWRRFVG 540 FVKKMKEGKN AERCWEQVER EAEHFVHISQ PLVQQAAVAL MH* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-144 | 115 | 545 | 436 | + beta-amylase | ||
PLN02161 | PLN02161 | 8.0e-146 | 115 | 545 | 442 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 582 | 582 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 106 | 553 | 448 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 115 | 545 | 434 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 582 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 582 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 582 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 582 | 1 | 562 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 582 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 111 | 545 | 2 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1wdp_A | 0 | 115 | 545 | 12 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6c_A | 0 | 115 | 545 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 115 | 545 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 115 | 545 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 411 | 173 | 583 | 0 |
HO798206 | 349 | 235 | 583 | 0 |
HO826564 | 406 | 171 | 576 | 0 |
DT555349 | 320 | 202 | 521 | 0 |
DY279190 | 349 | 234 | 582 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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