| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004339m |
| Family | CE8 |
| Protein Properties | Length: 582 Molecular Weight: 63714.1 Isoelectric Point: 7.1544 |
| Chromosome | Chromosome/Scaffold: 05875 Start: 1240459 End: 1243342 |
| Description | pectin methylesterase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 271 | 565 | 0 |
| AVVAADGSGDYETVSDAVAAAPKKSSKRYIIRIKAGVYRENVEVPKSKTNIMFLGDGRNTTIITASRNVVDGSTTFKSATVAVVGQGFLAKGVTFQNTAG PSKHQAVALRVGADLAAFYECDMLAYQDTLYVHSNRQFFINCLIAGTVDFIFGNSAVVFQDCDIHARKPNSGQKNMVTAQGRIDPNQNTGIVIQKSRIGA TSDLLPVQSSFPTYLGRPWKEYSRTVIMQSVISDVIDPAGWHEWNGDFALSTLFYGEYENSGAGSGTSDRVNWEGYKVITNASEAQGFTPSEFIA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MTQDKESLNG MPETRRNLIS FSMKHKKLFL ALFAFLLLVA AMIAIVTGIN SHDNGENSTS 60 HAILKSSCSS TRFPDLCFSA VASVRGATSN LASQKDVIEV SLNLTTTAVE HNYFTVKKLL 120 ATRKLTKREK TALHDCLETI DETLDELHKA LVDLKEYPSK KSLTQHADDL KTLMSAAMTN 180 QETCLDGFSY EKADKKVREA LLAGQVHVER MCSNALAMIK NMTDTDIAKA AAATTNRKLK 240 EEKDEESERW PEWMSVADRR LLQTSSVTPD AVVAADGSGD YETVSDAVAA APKKSSKRYI 300 IRIKAGVYRE NVEVPKSKTN IMFLGDGRNT TIITASRNVV DGSTTFKSAT VAVVGQGFLA 360 KGVTFQNTAG PSKHQAVALR VGADLAAFYE CDMLAYQDTL YVHSNRQFFI NCLIAGTVDF 420 IFGNSAVVFQ DCDIHARKPN SGQKNMVTAQ GRIDPNQNTG IVIQKSRIGA TSDLLPVQSS 480 FPTYLGRPWK EYSRTVIMQS VISDVIDPAG WHEWNGDFAL STLFYGEYEN SGAGSGTSDR 540 VNWEGYKVIT NASEAQGFTP SEFIAGHTWL TSTTFPFSLG L* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 6.0e-164 | 135 | 581 | 449 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 2.0e-166 | 44 | 581 | 548 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-177 | 42 | 581 | 546 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 0 | 42 | 581 | 559 | + Pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 270 | 566 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC01624.1 | 0 | 1 | 581 | 1 | 579 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
| RefSeq | XP_002265171.1 | 0 | 61 | 581 | 94 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304257.1 | 0 | 1 | 581 | 1 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326621.1 | 0 | 1 | 581 | 1 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532944.1 | 0 | 1 | 557 | 1 | 558 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 263 | 581 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 267 | 581 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-27 | 281 | 538 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-27 | 281 | 538 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 5e-27 | 281 | 538 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
