y
Basic Information | |
---|---|
Species | Manihot esculenta |
Cazyme ID | cassava4.1_004345m |
Family | GH14 |
Protein Properties | Length: 582 Molecular Weight: 64970.6 Isoelectric Point: 5.8679 |
Chromosome | Chromosome/Scaffold: 10563 Start: 1431954 End: 1434410 |
Description | beta-amylase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 119 | 539 | 0 |
FVMMPLDSVTMGNTVNRRKAMNASLQALKSAGVEGIMMDVWWGLVEREAPGVYNWGGYTELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEE IDNDPNLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYSDFMRAFRDNFRNLLGDTVVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYML SSLKAAAEAVGQPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWTYPYGEFFLSWYSQMLLDHGERILSSAKAILENTAVKISVKVAGIHWHYGTRSHAPE LTAGYYNTRFRDGYLPIAQMLGRHGAVFNFTCIEMHDHEQPQDALCSPEKLVMQVALATQEAQVPLAGENALPRYDDYAHEQILRAASLNIDENSGEREM CAFTYLRMSPHLFQEDNWRRF |
Full Sequence |
---|
Protein Sequence Length: 582 Download |
MALNITHQIG ALVGTPISVE PISTTASEST ATVSASAVWK TPTLIPRSKI QRTNGVEPKS 60 RLASPCPFPV QSGIRADLSA ACHAFAMEEM TLETTKEGEE ERMYREGSGK EKGKGVPVFV 120 MMPLDSVTMG NTVNRRKAMN ASLQALKSAG VEGIMMDVWW GLVEREAPGV YNWGGYTELL 180 EMAKRHGLKV QAVMSFHQCG GNVGDSCTIP LPKWVVEEID NDPNLAYTDQ WGRRNYEYVS 240 LGCDTLPVLK GRTPVQCYSD FMRAFRDNFR NLLGDTVVEI QVGMGPAGEL RYPSYPEQNG 300 TWKFPGIGAF QCYDKYMLSS LKAAAEAVGQ PEWGSTGPTD AGHYNNWPED TQFFRKENGG 360 WTYPYGEFFL SWYSQMLLDH GERILSSAKA ILENTAVKIS VKVAGIHWHY GTRSHAPELT 420 AGYYNTRFRD GYLPIAQMLG RHGAVFNFTC IEMHDHEQPQ DALCSPEKLV MQVALATQEA 480 QVPLAGENAL PRYDDYAHEQ ILRAASLNID ENSGEREMCA FTYLRMSPHL FQEDNWRRFV 540 AFVKKMKEGK NAERCREEVE REAEHFVHIS QPLVQDAAVA L* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 9.0e-141 | 114 | 546 | 443 | + beta-amylase | ||
PLN02905 | PLN02905 | 6.0e-141 | 116 | 546 | 435 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-180 | 116 | 546 | 434 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 581 | 581 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 63 | 549 | 494 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 581 | 1 | 574 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 581 | 1 | 568 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 581 | 3 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 580 | 1 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 581 | 1 | 572 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 112 | 546 | 2 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 112 | 546 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 112 | 546 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 112 | 546 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xfy_A | 0 | 112 | 546 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO779314 | 408 | 174 | 581 | 0 |
HO798206 | 346 | 236 | 581 | 0 |
DT555349 | 320 | 203 | 522 | 0 |
HO826564 | 406 | 172 | 577 | 0 |
FC901836 | 312 | 235 | 546 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|
![]() |