| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004357m |
| Family | CE8 |
| Protein Properties | Length: 582 Molecular Weight: 63640.5 Isoelectric Point: 9.6839 |
| Chromosome | Chromosome/Scaffold: 10504 Start: 211026 End: 214107 |
| Description | pectin methylesterase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 270 | 565 | 0 |
| NVVVAADGSGNYRTVSAAVAAAPTKSSKRYIIRIKAGVYRENVEVPKSKTNLMFLGDGRKTTIITGSRNVVDGSTTFKSATVAVVGQGFLARGVTFQNTA GPSKHQAVALRVGADLAAFYECDMLAYQDTLYVHSNRQFFINCLIAGTVDFIFGNSAAVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIG ATSDLRPVQGSFPTYLGRPWKEYSRTVIMQSTISDVINPAGWHEWQGNFALNTLFYGEYQNSGAGAGTSRRVRWRGFKVITSATEAQGFTPGRFIA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MAQDKESLTG MPETSKLISF SKKHKKLFLS LFASFLLVAA IVAIVSGVKK SEDDTSQSHA 60 ILKSSCSSTR YPDLCFSAVV SVPGATSNLA TQKDVIEVSL NITTEAVQHN YFTVKKLRAK 120 KKLTKREKIA LHDCLETIDE TLDELHEVLE DLKEYPSKKS LSQHADDLKT LMSAAITNQE 180 TCLDGFSHEK ADKEVRKALL AGQVHVKRMC SNALAMIKNM TDTDIINELK LATSTTNRKL 240 KEEKDEESGW PGWLSVADRR LLQSSSVTPN VVVAADGSGN YRTVSAAVAA APTKSSKRYI 300 IRIKAGVYRE NVEVPKSKTN LMFLGDGRKT TIITGSRNVV DGSTTFKSAT VAVVGQGFLA 360 RGVTFQNTAG PSKHQAVALR VGADLAAFYE CDMLAYQDTL YVHSNRQFFI NCLIAGTVDF 420 IFGNSAAVLQ DCDIHARRPN SGQKNMVTAQ GRTDPNQNTG IVIQKCRIGA TSDLRPVQGS 480 FPTYLGRPWK EYSRTVIMQS TISDVINPAG WHEWQGNFAL NTLFYGEYQN SGAGAGTSRR 540 VRWRGFKVIT SATEAQGFTP GRFIAGGSWL RSTTFPFSLG L* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 4.0e-169 | 130 | 581 | 456 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 1.0e-173 | 58 | 581 | 527 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 0 | 55 | 581 | 535 | + Pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 270 | 566 | 297 | + Pectinesterase. | ||
| PLN02301 | PLN02301 | 0 | 61 | 581 | 523 | + pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | P83948 | 0 | 49 | 581 | 55 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
| RefSeq | XP_002265171.1 | 0 | 1 | 581 | 31 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304257.1 | 0 | 1 | 581 | 1 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326621.1 | 0 | 1 | 581 | 1 | 579 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532944.1 | 0 | 1 | 557 | 1 | 558 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 263 | 581 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 267 | 581 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-26 | 266 | 542 | 1 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-26 | 266 | 542 | 1 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-26 | 266 | 542 | 1 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
