| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004529m |
| Family | GT4 |
| Protein Properties | Length: 571 Molecular Weight: 64708.5 Isoelectric Point: 7.3039 |
| Chromosome | Chromosome/Scaffold: 11279 Start: 434983 End: 441237 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 324 | 426 | 9.8e-21 |
| AYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQIAAKRLDLKVNFLKGRDHADDSLHGYKVFINPSVSDVLCTATAEALAMGKFVICA DHP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 571 Download |
| MYQNSWHILL GNLDLFWINL VLEEANICDK IVESLCSKRK NQFLLRSLSA GESTFFDNEN 60 VNDELDLRIA SVLQSTGHRY EGGFWTDLSK HNPSDGKRHV AIVTTASLPW MTGTAVNPLF 120 RAAYLSKSEK QKVTLLVPWL CKSDQELVYP NNLTFSSPEE QENYIRNWLE DRVGFKADFK 180 ISFYPGKFSK ARRSIIPAGD TSQFIPSKDA DIAILEEPEH LNWYHHGKRW TDKFNHVVGV 240 VHTNYLEYIK RERNGALQAF FVKHINNWVT RAYCHKVLRL SAATQNLPKS VICNVHGVNP 300 KFLKIGEKIA VERELGQPAF SKGAYFLGKM VWAKGYRELI DLLAKHKNEL DGFNLDVFGN 360 GEDAHEVQIA AKRLDLKVNF LKGRDHADDS LHGYKVFINP SVSDVLCTAT AEALAMGKFV 420 ICADHPSNEF FRSFPNCLTY KTSEDFVAKV KEALANEPQP LTPEQRYNLS WEAATERFMQ 480 YSELDKVLND DNGNTTFSKT NGKSIAKAVS LPKMSEVVDG GLAFAHYCLT GNEFLRLCTG 540 AIPGTRDYDK QHCKDLHLLP PQVENPIYGW * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00534 | Glycos_transf_1 | 2.0e-10 | 326 | 458 | 140 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| TIGR00032 | argG | 5.0e-13 | 226 | 490 | 288 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 1.0e-13 | 98 | 481 | 399 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02501 | PLN02501 | 0 | 26 | 570 | 545 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 97 | 561 | 465 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA55727.1 | 0 | 26 | 570 | 236 | 780 | digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] |
| Swiss-Prot | Q6DW76 | 0 | 26 | 570 | 239 | 783 | DGDG1_SOYBN RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor |
| RefSeq | XP_002264659.1 | 0 | 24 | 570 | 252 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323386.1 | 0 | 26 | 570 | 251 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 26 | 570 | 253 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.006 | 317 | 336 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Signal Peptide | ||||
|---|---|---|---|---|
| Cleavage Site | ||||
| 23 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 169 | 571 | 0 |
| GO850017 | 334 | 89 | 422 | 0 |
| GO850146 | 328 | 149 | 476 | 0 |
| ES813055 | 384 | 51 | 430 | 0 |
| GO871962 | 321 | 94 | 414 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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