y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004607m |
Family | CE8 |
Protein Properties | Length: 567 Molecular Weight: 60885.6 Isoelectric Point: 9.4612 |
Chromosome | Chromosome/Scaffold: 10102 Start: 36782 End: 40213 |
Description | pectin methylesterase 61 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 258 | 549 | 0 |
AVVAKDGSGTHKTIADAIGVLGSLASGGRNVIYIKAGTYKENLNFPTKQKNVMLVGDGKGKTVIVGNRNADDGSSTFSSATVAAMGDGFIARGITFINSA GPEKHQAVALRVGSDRSVIFQCSIEGYQDSLYTHSKRQFYRETDIYGTIDFIFGNSAVVFQNCNIFARKPSSGSRNYVTAQGRTDPNQNTGISIHNCKIG SESGGSKLTYLGRPWQKYSRTVVMQSFIDGSINPAGWYPWSGSFALSTLYYGEYMNSGPGASTSGRVNWPGYHGALTPTAAQTFTVGSLIDG |
Full Sequence |
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Protein Sequence Length: 567 Download |
MASFSHAKLR SKKFSIPLTI FFIIKLFFVS SLAEVNNDKS PIPSHFSKSS MAATQLSISS 60 ACKATIYKAA CESFLVSLQT TAKTQHELFD LSVEYTMKQS QSAINLASSL SLSAHGNAQT 120 HLVSAGAMAD CIELLDDTLD QLSNVINRKN NLIQSHNDVR TWLSAALTNQ ETCIESLQNS 180 KIKEQKGLMV STARNLSHHI SNSLAIYVSH YVTEEANKLN PGGTGGRKLL SGNKFPSWVS 240 ATDRKLVEAP VGEIKAHAVV AKDGSGTHKT IADAIGVLGS LASGGRNVIY IKAGTYKENL 300 NFPTKQKNVM LVGDGKGKTV IVGNRNADDG SSTFSSATVA AMGDGFIARG ITFINSAGPE 360 KHQAVALRVG SDRSVIFQCS IEGYQDSLYT HSKRQFYRET DIYGTIDFIF GNSAVVFQNC 420 NIFARKPSSG SRNYVTAQGR TDPNQNTGIS IHNCKIGSES GGSKLTYLGR PWQKYSRTVV 480 MQSFIDGSIN PAGWYPWSGS FALSTLYYGE YMNSGPGAST SGRVNWPGYH GALTPTAAQT 540 FTVGSLIDGN MWLPSTGVSF DSGLIG* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 7.0e-165 | 11 | 565 | 584 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 8.0e-171 | 10 | 564 | 570 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02170 | PLN02170 | 0 | 5 | 565 | 565 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 257 | 550 | 299 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 127 | 564 | 447 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69695.1 | 0 | 85 | 566 | 47 | 550 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
EMBL | CBI39447.1 | 0 | 227 | 565 | 99 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181833.1 | 0 | 89 | 565 | 62 | 517 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_191460.1 | 0 | 92 | 565 | 69 | 529 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002527752.1 | 0 | 43 | 566 | 45 | 583 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 254 | 564 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 254 | 564 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-18 | 257 | 521 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-18 | 257 | 521 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-18 | 257 | 521 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV441952 | 210 | 339 | 548 | 0 |
FY433569 | 295 | 249 | 543 | 0 |
HO777316 | 448 | 126 | 564 | 0 |
EG693733 | 253 | 315 | 567 | 0 |
CK644101 | 198 | 351 | 548 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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