| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004619m |
| Family | GT5 |
| Protein Properties | Length: 566 Molecular Weight: 63140.8 Isoelectric Point: 5.7457 |
| Chromosome | Chromosome/Scaffold: 11495 Start: 97198 End: 103534 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 56 | 555 | 0 |
| NIVFVAAEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHFIHQDKVFANALDLDRHIKVHCFGGAQDVSFFHEYREGVDWVFVDHPSYHRPGNP YGDSRGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLANDWHAGLVPVLLAAKYRPHGVYKDARCLLVIHNLAHQGVEPAVTYKNFGLPSEWYG ALEWVFPNWARAHALDKGEAVNVLKGAIVTADRILTVSKGYAWEVTTVEGGYGLHELLSSRRSVLDGITNGIDVSEWDPSADEHIAAHYSVDDLSGKVQC KIALQKELGLPIRPMCPLIGFIGRLDYQKGIDLIRWAIPELMEDDVQFVMLGSGDPLYEEWMRVTESSYRDKFRGWVGFNVPISHRITAGCDILLMPSRF EPCGLNQLFAMRYGTVPVVHSTGGLRDTVQTFNPYADGGIDEGTGWTFSPLSKDSMLTAIRLAVKTYRDYKSSWEGIMKRGMERDNTWENAAIHYEQVFE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MSMLKICATA YYKIIHCTFP TGDGGIESHE DVATEIAEET ENTEGREEAQ VREKLNIVFV 60 AAEAAPYSKT GGLGDVCGSL PIVLAARGHR VMVVSPRYLH FIHQDKVFAN ALDLDRHIKV 120 HCFGGAQDVS FFHEYREGVD WVFVDHPSYH RPGNPYGDSR GAFGDNQFRF TLLCHAACEA 180 PLVLPLGGYT YGEKCLFLAN DWHAGLVPVL LAAKYRPHGV YKDARCLLVI HNLAHQGVEP 240 AVTYKNFGLP SEWYGALEWV FPNWARAHAL DKGEAVNVLK GAIVTADRIL TVSKGYAWEV 300 TTVEGGYGLH ELLSSRRSVL DGITNGIDVS EWDPSADEHI AAHYSVDDLS GKVQCKIALQ 360 KELGLPIRPM CPLIGFIGRL DYQKGIDLIR WAIPELMEDD VQFVMLGSGD PLYEEWMRVT 420 ESSYRDKFRG WVGFNVPISH RITAGCDILL MPSRFEPCGL NQLFAMRYGT VPVVHSTGGL 480 RDTVQTFNPY ADGGIDEGTG WTFSPLSKDS MLTAIRLAVK TYRDYKSSWE GIMKRGMERD 540 NTWENAAIHY EQVFEWAFID SPYIS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-103 | 55 | 554 | 510 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 3.0e-142 | 56 | 557 | 511 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 6.0e-174 | 55 | 555 | 509 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 56 | 556 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 55 | 555 | 502 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25893.1 | 0 | 21 | 565 | 89 | 633 | starch synthase isoform I [Manihot esculenta] |
| DDBJ | BAD18845.1 | 0 | 23 | 563 | 94 | 644 | starch synthase I precursor [Phaseolus vulgaris] |
| EMBL | CBI23015.1 | 0 | 20 | 565 | 22 | 568 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277372.1 | 0 | 20 | 565 | 87 | 633 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321996.1 | 0 | 26 | 565 | 110 | 649 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 55 | 554 | 10 | 508 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 3vue_A | 0 | 55 | 554 | 10 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 55 | 554 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 55 | 554 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 55 | 554 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO595058 | 492 | 72 | 563 | 0 |
| HO581986 | 368 | 165 | 531 | 0 |
| GO872237 | 347 | 216 | 562 | 0 |
| GO842198 | 336 | 79 | 414 | 0 |
| HO581986 | 34 | 530 | 563 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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