y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004724m |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 60981.9 Isoelectric Point: 8.4514 |
Chromosome | Chromosome/Scaffold: 07859 Start: 19961 End: 22747 |
Description | pectin methylesterase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 249 | 545 | 0 |
NVVVAADGSGNYRTVGEAVAAAPGGSSSRYIIRIKAGVYRENVEVPSGKTNIMFVGDGRTTTIITGNRNVVDGSTTFRSATVAAVGDGFLARDITFQNSA GPSKHQAVALRVGSDKSAFYRCDMIAYQDTLYVHSLRQFYVSCIIIGSVDFIFGNAAAVFQNCDIHARRPNSGQKNMVTAQGREDPNQNTGIVIQKCRIG ATQDLEAVIASFPTYLGRPWKLYSRTVIMQSEISDIINPAGWFEWDGDFALDTLFYREYQNTGAGANTANRVKWKGFKVMTSSSEAQPFTAANFISG |
Full Sequence |
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Protein Sequence Length: 561 Download |
MGLFASILLV TAIVGIVAGV ASNRKSSAIN DHQEAHAILK SSCSSTLYPD LCFSAISTLP 60 DASSKIKSTK DVIDLSLNLS RTSVEQTFRK IKQLSFRRSS FTKRETTAIG DCLEVLNGTL 120 DKIKKAVQDL KSYPSLKKSI AEHADDLKIL LSAAMTDQET CLDGFSHDKA DEKVRKPFLS 180 DERHVHRLCS NTLALIKNMT DTDMAAEKHL SSSSSSSGRK LEEENGIEWP QWMSAGDRRL 240 LQAGGVTPNV VVAADGSGNY RTVGEAVAAA PGGSSSRYII RIKAGVYREN VEVPSGKTNI 300 MFVGDGRTTT IITGNRNVVD GSTTFRSATV AAVGDGFLAR DITFQNSAGP SKHQAVALRV 360 GSDKSAFYRC DMIAYQDTLY VHSLRQFYVS CIIIGSVDFI FGNAAAVFQN CDIHARRPNS 420 GQKNMVTAQG REDPNQNTGI VIQKCRIGAT QDLEAVIASF PTYLGRPWKL YSRTVIMQSE 480 ISDIINPAGW FEWDGDFALD TLFYREYQNT GAGANTANRV KWKGFKVMTS SSEAQPFTAA 540 NFISGNDWLP STGFPYSLGL * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-171 | 3 | 560 | 565 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 9.0e-173 | 83 | 560 | 483 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 22 | 560 | 546 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 249 | 546 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 38 | 560 | 525 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB57670.1 | 0 | 24 | 560 | 54 | 584 | pectinesterase [Citrus sinensis] |
Swiss-Prot | P83948 | 0 | 24 | 560 | 54 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002304257.1 | 0 | 36 | 560 | 60 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324773.1 | 0 | 21 | 560 | 39 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516186.1 | 0 | 24 | 560 | 50 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 560 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 246 | 560 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-22 | 246 | 551 | 2 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-22 | 246 | 551 | 2 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-22 | 246 | 551 | 2 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |