| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004735m |
| Family | AA5 |
| Protein Properties | Length: 561 Molecular Weight: 62755.2 Isoelectric Point: 8.0979 |
| Chromosome | Chromosome/Scaffold: 04209 Start: 67851 End: 69533 |
| Description | glyoxal oxidase-related protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 36 | 560 | 0 |
| TGGRWAILQESIGISAMHIQVLKNNKVIIFDRTDFGFSNLSLPNGICRCNNETIRHKDCTAHSVLYDIASNSNRPLTILTNTWCSSGAVDPNGTFIQFGG DKEGERVIRAFTPCDDDSCDWVELSRPLFSRRWYASSQILPDGRIIVVGGRRVFTYEFYPKTSQTGDNFFLRFLVKTRDPQEENNLYPFLHLLPDGNLFI FANNRSILLDYTRNKVIKEYPVLPYGARNFPCTGSSILLPLQLNRGTDAAELPEAEVMICGGSKHGSYVKAYTDQVFEEASRTCGRLRVTDPKPSWSMEL MPTPRVMNDMLLLPTGAVILINGATNGSAGWNDAVNPVFHPVLYLPEEHPAQRFVVMNPSDIPRMYHSTAALLPDGRILVGGSNPHPTYNFTAYPYRTEL SLEAFYPPYLDPLYAHLKPTILGVKSTGGTVSYKEMFSVTFVLTFYRSDLGMSVVMMTPSFNTHSVSMNQRMLVLKLVNVERLLAYGYKVNVIGPTNVNV APPGYYMLFLVNAGIPSHAVWVRVR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MAIKDLTFLI FPLILSLLML CSQHFAHSAS FFSTTTGGRW AILQESIGIS AMHIQVLKNN 60 KVIIFDRTDF GFSNLSLPNG ICRCNNETIR HKDCTAHSVL YDIASNSNRP LTILTNTWCS 120 SGAVDPNGTF IQFGGDKEGE RVIRAFTPCD DDSCDWVELS RPLFSRRWYA SSQILPDGRI 180 IVVGGRRVFT YEFYPKTSQT GDNFFLRFLV KTRDPQEENN LYPFLHLLPD GNLFIFANNR 240 SILLDYTRNK VIKEYPVLPY GARNFPCTGS SILLPLQLNR GTDAAELPEA EVMICGGSKH 300 GSYVKAYTDQ VFEEASRTCG RLRVTDPKPS WSMELMPTPR VMNDMLLLPT GAVILINGAT 360 NGSAGWNDAV NPVFHPVLYL PEEHPAQRFV VMNPSDIPRM YHSTAALLPD GRILVGGSNP 420 HPTYNFTAYP YRTELSLEAF YPPYLDPLYA HLKPTILGVK STGGTVSYKE MFSVTFVLTF 480 YRSDLGMSVV MMTPSFNTHS VSMNQRMLVL KLVNVERLLA YGYKVNVIGP TNVNVAPPGY 540 YMLFLVNAGI PSHAVWVRVR * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 3.0e-25 | 454 | 559 | 107 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 2.0e-27 | 448 | 559 | 113 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 1.0e-120 | 52 | 297 | 248 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF43943.1 | 0 | 36 | 559 | 39 | 564 | AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb |
| RefSeq | NP_172895.1 | 0 | 36 | 556 | 39 | 561 | glyoxal oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269734.1 | 0 | 1 | 560 | 312 | 874 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312784.1 | 0 | 19 | 559 | 1 | 543 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520142.1 | 0 | 8 | 560 | 11 | 567 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wq8_A | 1e-17 | 107 | 559 | 237 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
| PDB | 2eic_A | 3e-17 | 107 | 559 | 215 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2eib_A | 5e-17 | 107 | 559 | 215 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 1k3i_A | 6e-17 | 107 | 559 | 232 | 654 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2eid_A | 7e-17 | 107 | 559 | 215 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
