| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_004790m |
| Family | AA1 |
| Protein Properties | Length: 558 Molecular Weight: 61382 Isoelectric Point: 8.2021 |
| Chromosome | Chromosome/Scaffold: 03581 Start: 482162 End: 484699 |
| Description | laccase 6 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 19 | 544 | 0 |
| TRFYDFKVHTMTVKKLCNSKEIVAVNNKYPGPVVYAQQGDRIIVKVTNESPHNVTIHWHGVRQILSCWFDGPSYITQCPIQPGQSFTYEFTLVRQKGTFF WHAHVSWLRGTVYGAIVVYPKAGVPYPFKHPYEEHIVILGEYWLQDVVQLEQQVLASGAPSPPSNAYTINGHPGPNYNCSANDVYRLNVVPGKTYLLRLI NAGVNMENFFAIANHKLTIVEADAEYTKPFTTDRVMLGPGQTMMVLVTADQPIGKYSMAVGPYMSAHGVSFQNNSAIAYFQYAGVVPNSISLPAKLPNFN DNLAVKTVMDGLRSLNASNVPKEIDANLFVTIGINVNKCRSKTPKQSCHGLNNGTMAASMNNISFIMPTVSILEAYYKGIEGFFTDDFPGAPLRFYDFVN GAPNNAPNDTNSVNGTRTKVLEYGSRVQIIMQDTGTVTTENHPIHLHGYSFYVVGYGTGNYDPKTAKLNLVDPPYMNTIGVPVGGWAAIRFVADNPGVWF MHCHFDVHQSWGLATVLIVKNGKGHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MSGGYTVLSA ADWPGGGSTR FYDFKVHTMT VKKLCNSKEI VAVNNKYPGP VVYAQQGDRI 60 IVKVTNESPH NVTIHWHGVR QILSCWFDGP SYITQCPIQP GQSFTYEFTL VRQKGTFFWH 120 AHVSWLRGTV YGAIVVYPKA GVPYPFKHPY EEHIVILGEY WLQDVVQLEQ QVLASGAPSP 180 PSNAYTINGH PGPNYNCSAN DVYRLNVVPG KTYLLRLINA GVNMENFFAI ANHKLTIVEA 240 DAEYTKPFTT DRVMLGPGQT MMVLVTADQP IGKYSMAVGP YMSAHGVSFQ NNSAIAYFQY 300 AGVVPNSISL PAKLPNFNDN LAVKTVMDGL RSLNASNVPK EIDANLFVTI GINVNKCRSK 360 TPKQSCHGLN NGTMAASMNN ISFIMPTVSI LEAYYKGIEG FFTDDFPGAP LRFYDFVNGA 420 PNNAPNDTNS VNGTRTKVLE YGSRVQIIMQ DTGTVTTENH PIHLHGYSFY VVGYGTGNYD 480 PKTAKLNLVD PPYMNTIGVP VGGWAAIRFV ADNPGVWFMH CHFDVHQSWG LATVLIVKNG 540 KGHLQTLPHP PADLPRC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 2.0e-66 | 6 | 536 | 568 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-80 | 35 | 534 | 548 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 4.0e-87 | 19 | 534 | 562 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 17 | 557 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN75876.1 | 0 | 6 | 557 | 20 | 571 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_182180.1 | 0 | 16 | 557 | 28 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264410.1 | 0 | 6 | 557 | 20 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320207.1 | 0 | 29 | 557 | 1 | 529 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523314.1 | 0 | 13 | 557 | 28 | 572 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 20 | 535 | 4 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Occk5 (Opdh) |
| PDB | 1asq_A | 0 | 20 | 535 | 4 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Occk5 (Opdh) |
| PDB | 1asp_B | 0 | 20 | 535 | 4 | 521 | A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Occk5 (Opdh) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 504 | 63 | 558 | 0 |
| EL350827 | 281 | 36 | 316 | 0 |
| DW134242 | 275 | 11 | 285 | 0 |
| DW157222 | 259 | 11 | 269 | 0 |
| DY962939 | 259 | 11 | 269 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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